RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 NEIL2Q969S2 332 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 KIAA1143Q96AT1 154 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 FKBP10Q96AY3 582 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TM4SF19Q96DZ7 209 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MED8Q96G25 268 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TSNARE1Q96NA8 513 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 GBP5Q96PP8 586 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MRPL57Q9BQC6 102 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TMEM79Q9BSE2 394 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 NLNQ9BYT8 704 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CD244Q9BZW8 370 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MRPL46Q9H2W6 279 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ALG9Q9H6U8 611 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CLK4Q9HAZ1 481 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 DNAJC11Q9NVH1 559 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 MKS1Q9NXB0 559 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 LGALS13Q9UHV8 139 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC22A14Q9Y267 594 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 TSC22D4Q9Y3Q8 395 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 CFAP47Q6ZTR5 3102 aa10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 KMT2BQ9UMN6 2715 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-212ENST00000502563 ZZEF1O43149 2961 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 H7BY64 318 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 DSCR3O14972 297 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 TAPBPO15533 448 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 PRPF4O43172 522 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■□□□□ 8.4
UBE2D3-212ENST00000502563 KATNA1O75449 491 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 S100BP04271 92 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 PIM1P11309 404 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 AGXTP21549 392 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 SERPINB1P30740 379 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 HPDP32754 393 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 REEP5Q00765 189 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 IRF9Q00978 393 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 VAC14Q08AM6 782 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CDC16Q13042 620 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 GPS2Q13227 327 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 C10orf62Q5T681 223 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 NXPE4Q6UWF7 544 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 TMEM151AQ8N4L1 468 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 ZSCAN1Q8NBB4 408 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CAMKVQ8NCB2 501 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 HNRNPLLQ8WVV9 542 aaKnown RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 RERGQ96A58 199 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 PYCR2Q96C36 320 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 PRAP1Q96NZ9 151 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CATSPER2Q96P56 530 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 AIF1LQ9BQI0 150 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 NDC1Q9BTX1 674 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 EFCAB11Q9BUY7 163 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 KLHL25Q9H0H3 589 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 PRORYQ9H606 182 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 WDR54Q9H977 334 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 WWOXQ9NZC7 414 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 CD274Q9NZQ7 290 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 DCDC2Q9UHG0 476 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 DYRK1BQ9Y463 629 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC22A7Q9Y694 548 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 ANKRD12Q6UB98 2062 aa10.25□□□□□ -0.77
UBE2D3-212ENST00000502563 IGLV3-12A0A075B6K2 115 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 TEX51A0A1B0GUA7 166 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 H0YGG7 62 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 K7EPI3 171 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 PCDH17O14917 1159 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 HAT1O14929 419 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 WFS1O76024 890 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 WDR47O94967 919 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SHBGP04278 402 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 ITGB2P05107 769 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CAPN1P07384 714 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SLC35G6P0C7Q6 338 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 C1GALT1C1LP0DN25 315 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CDH1P12830 882 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SCTRP47872 440 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 ARFIP1P53367 373 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 ARF3P61204 181 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 YBX1P67809 324 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 DCDP81605 110 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 LAPTM5Q13571 262 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 PDK4Q16654 411 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 NDUFA9Q16795 377 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 DEFB110Q30KQ9 67 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 WASHC2DQ5SRD0 308 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 FRMPD2BQ6IN97 320 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 FAM198BQ6UWH4 519 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 CCDC81Q6ZN84 652 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SLCO4C1Q6ZQN7 724 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MED25Q71SY5 747 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 VN1R4Q7Z5H5 301 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SYVN1Q86TM6 617 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 FAM20CQ8IXL6 584 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 PLD6Q8N2A8 252 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 SPATA6LQ8N4H0 392 aa10.24□□□□□ -0.77
UBE2D3-212ENST00000502563 MFSD9Q8NBP5 474 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms