RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 PIK3CGP48736 1102 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 REEP5Q00765 189 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 MAP7Q14244 749 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TBCCQ15814 346 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 PRAMEF9Q5VWM5 478 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TLDC1Q6P9B6 456 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TMPRSS11BQ86T26 416 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 TMEM126BQ8IUX1 230 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 PLD3Q8IV08 490 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 OR4N4Q8N0Y3 316 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 RDH11Q8TC12 318 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 PHF21BQ96EK2 531 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 SPRTNQ9H040 489 aaPredicted RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
RNF4-202ENST00000502316 PLLPQ9Y342 182 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 PCDHGA4Q9Y5G9 962 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 ACTL7BQ9Y614 415 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
RNF4-202ENST00000502316 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 LRRC14BA6NHZ5 514 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 G3V2L1 256 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 H0YGG7 62 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 TYROBPO43914 113 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 DLX3O60479 287 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 WFS1O76024 890 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 KIAA0754O94854 1291 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 MYZAPP0CAP1 466 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 C1GALT1C1LP0DN25 315 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 LIPCP11150 499 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 EPB42P16452 691 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 ATP5F1P24539 256 aaPredicted RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 EEF1DP29692 281 aaKnown RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 BCL6P41182 706 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 EMP3P54852 163 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 VSX2P58304 361 aaPredicted RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 ARF3P61204 181 aaPredicted RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 HERVK_113P63132 956 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 PRAMEF17Q5VTA0 474 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 ZYG11AQ6WRX3 759 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 EXOC3L1Q86VI1 746 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 ZFAND4Q86XD8 727 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 PROSER1Q86XN7 944 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 SLC22A9Q8IVM8 553 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 TEX9Q8N6V9 391 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 SNX31Q8N9S9 440 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 KDF1Q8NAX2 398 aaPredicted RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 SLC38A9Q8NBW4 561 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 ZNF740Q8NDX6 193 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 CCDC126Q96EE4 140 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 LRFN5Q96NI6 719 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 AIF1LQ9BQI0 150 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 PITHD1Q9GZP4 211 aaPredicted RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 GEMIN8Q9NWZ8 242 aaKnown RBP13.55□□□□□ -0.24
RNF4-202ENST00000502316 PCTPQ9UKL6 214 aa13.55□□□□□ -0.24
RNF4-202ENST00000502316 FEZF1A0PJY2 475 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 CLGNO14967 610 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 ZNF749O43361 778 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 KATNA1O75449 491 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 HBQ1P09105 142 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 CREB1P16220 341 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 CXCR2P25025 360 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 VARSP26640 1264 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 RORAP35398 523 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 SCTRP47872 440 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 PRKAA2P54646 552 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 GTF2H2Q13888 395 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 DOC2AQ14183 400 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 GRM7Q14831 915 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 PRTGQ2VWP7 1150 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 WASHC2DQ5SRD0 308 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 YOD1Q5VVQ6 348 aaPredicted RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 RHBDD2Q6NTF9 364 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 GTF2H2CQ6P1K8 395 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 ZNF517Q6ZMY9 492 aaPredicted RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 GOLGA7Q7Z5G4 137 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 ARHGEF39Q8N4T4 335 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 MFSD9Q8NBP5 474 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 ZNF248Q8NDW4 579 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 RERGQ96A58 199 aaPredicted RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 TM4SF19Q96DZ7 209 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 L3HYPDHQ96EM0 354 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 PTCD3Q96EY7 689 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 RUFY1Q96T51 708 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 EFCAB11Q9BUY7 163 aa13.54□□□□□ -0.24
RNF4-202ENST00000502316 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 C12orf65Q9H3J6 166 aaKnown RBP13.54□□□□□ -0.24
RNF4-202ENST00000502316 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms