RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 B3GNT8Q7Z7M8 397 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 RAVER1Q8IY67 606 aaKnown RBP9.53□□□□□ -0.88
CLIP1-204ENST00000501271 TRAM1L1Q8N609 369 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 MIPOL1Q8TD10 442 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 IRF7Q92985 503 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
CLIP1-204ENST00000501271 BORCS5Q969J3 196 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 ZNF566Q969W8 418 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 MRGPRX3Q96LB0 322 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 HEPHQ9BQS7 1158 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 CCDC90BQ9GZT6 254 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 BAG5Q9UL15 447 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 ERVW-1Q9UQF0 538 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 RUVBL1Q9Y265 456 aaKnown RBP9.53□□□□□ -0.88
CLIP1-204ENST00000501271 SNX5Q9Y5X3 404 aa9.53□□□□□ -0.88
CLIP1-204ENST00000501271 CHD7Q9P2D1 2997 aa9.52□□□□□ -0.88
CLIP1-204ENST00000501271 H0YIV9 168 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SCAMP2O15127 329 aaKnown RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 MOSPD3O75425 235 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ANGPTL1O95841 491 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SLC16A8O95907 504 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CCDC159P0C7I6 412 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CCL5P13501 91 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CSF2RAP15509 400 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ITIH1P19827 911 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 IMPA1P29218 277 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 EPHA2P29317 976 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 C21orf58P58505 322 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 GAB1Q13480 694 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 MOGQ16653 247 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 HKDC1Q2TB90 917 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 LY6G5CQ5SRR4 150 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CAPN13Q6MZZ7 669 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ERICH5Q6P6B1 374 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 Q6ZNX1 250 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CBLL1Q75N03 491 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 GPR65Q8IYL9 337 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SYNPOQ8N3V7 929 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 C1orf52Q8N6N3 182 aaKnown RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 FAR1Q8WVX9 515 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 LZICQ8WZA0 190 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 RHNO1Q9BSD3 238 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ZSCAN5AQ9BUG6 496 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 DUSP26Q9BV47 211 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CHST8Q9H2A9 424 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 TPT1P8Q9HAU6 139 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SGK2Q9HBY8 427 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SPHK2Q9NRA0 654 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ENPP5Q9UJA9 477 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 RPS6KA6Q9UK32 745 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 VPS4AQ9UN37 437 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 C1orf226A1L170 272 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 GABRR3A8MPY1 467 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 NPC1O15118 1278 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 BCAS1O75363 584 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CXCL14O95715 111 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ADH1AP07327 375 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 LINC00271P0C7V0 271 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PCSK2P16519 638 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 FPR1P21462 350 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PBLDP30039 288 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 HOXA9P31269 272 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 DNAJA1P31689 397 aaKnown RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 EMX1Q04741 257 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ZNF33BQ06732 778 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 TBC1D25Q3MII6 688 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PDE12Q6L8Q7 609 aaKnown RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CRTC3Q6UUV7 619 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 EIF3MQ7L2H7 374 aaKnown RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 HORMAD1Q86X24 394 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ZNF366Q8N895 744 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 GPR156Q8NFN8 814 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 BTN2A2Q8WVV5 523 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 TMEM159Q96B96 161 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SAMD11Q96NU1 681 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PKP4Q99569 1192 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 FAM83CQ9BQN1 747 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 TBC1D23Q9NUY8 699 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SIRT5Q9NXA8 310 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PDP1Q9P0J1 537 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ERVK-18Q9QC07 812 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 ITM2BQ9Y287 266 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 CORINQ9Y5Q5 1042 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 HCFC2Q9Y5Z7 792 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 DGKBQ9Y6T7 804 aa9.52□□□□□ -0.89
CLIP1-204ENST00000501271 SLC5A10A0PJK1 596 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 TSPAN11A1L157 253 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 J3QRK9 145 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 M0QX08 132 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 UGT2B11O75310 529 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 RFPL2O75678 378 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 CLPXO76031 633 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 FKBP9O95302 570 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 ACRP10323 421 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 PDHA2P29803 388 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 CD6P30203 668 aa9.51□□□□□ -0.89
CLIP1-204ENST00000501271 HNF4AP41235 474 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms