RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NIPSNAP2O75323 286 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 NDUFS3O75489 264 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 IFNB1P01574 187 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 EZRP15311 586 aaKnown RBP13.89□□□□□ -0.19
TRAF4-212ENST00000498540 CAPN3P20807 821 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 FDFT1P37268 417 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 CRADDP78560 199 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 ALDH6A1Q02252 535 aaKnown RBP13.89□□□□□ -0.19
TRAF4-212ENST00000498540 TLE4Q04727 773 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 MFSD4BQ5TF39 518 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 ICE2Q659A1 982 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 PLAG1Q6DJT9 500 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 H3F3CQ6NXT2 135 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 PRSS41Q7RTY9 318 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 CPEB2Q7Z5Q1 589 aaKnown RBP13.89□□□□□ -0.19
TRAF4-212ENST00000498540 LRRC6Q86X45 466 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 CRLF3Q8IUI8 442 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 PLD3Q8IV08 490 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 PPFIBP2Q8ND30 876 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 OR9A4Q8NGU2 314 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 METTL21AQ8WXB1 218 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 FRMD6Q96NE9 622 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 BIRC8Q96P09 236 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 TREX1Q9NSU2 369 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 NPIPA1Q9UND3 350 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 PCDHGB6Q9Y5F9 930 aa13.89□□□□□ -0.19
TRAF4-212ENST00000498540 ASPDHA6ND91 283 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 MYO1CO00159 1063 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 HAT1O14929 419 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 ETS1P14921 441 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 CD96P40200 585 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 HSF1Q00613 529 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
TRAF4-212ENST00000498540 FAM53BQ14153 422 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 OR1C1Q15619 314 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 OASLQ15646 514 aaKnown RBP13.88□□□□□ -0.19
TRAF4-212ENST00000498540 MINDY4Q4G0A6 757 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 ANKRD20A4Q4UJ75 823 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 KRTCAP3Q53RY4 240 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 SPINK14Q6IE38 97 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 C3P1Q6ZMU1 363 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 PEX26Q7Z412 305 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 SIAH3Q8IW03 269 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 MPP5Q8N3R9 675 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 ACBD4Q8NC06 268 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 CHTF18Q8WVB6 975 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 SCMH1Q96GD3 660 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 ZNF354BQ96LW1 612 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 CYTH2Q99418 400 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 SPOCK3Q9BQ16 436 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 GPAMQ9HCL2 828 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 GALPQ9UBC7 116 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 AMFRQ9UKV5 643 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-212ENST00000498540 SCN3AQ9NY46 2000 aa13.88□□□□□ -0.19
TRAF4-212ENST00000498540 LIASO43766 372 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 PSIP1O75475 530 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 FTCDO95954 541 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 APRTP07741 180 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 PKMP14618 531 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ARNTP27540 789 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 NMBRP28336 390 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 EEF1DP29692 281 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ATP5DP30049 168 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 FMO4P31512 558 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 STIP1P31948 543 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 AVPR1BP47901 424 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 PNLIPRP1P54315 467 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 SESN2P58004 480 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 CSNK1G2P78368 415 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ARHGAP19Q14CB8 494 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ACSBG2Q5FVE4 666 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 PCID2Q5JVF3 399 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ADCK2Q7Z695 626 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ANKRD37Q7Z713 158 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 CHERPQ8IWX8 916 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ACRBPQ8NEB7 543 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 AGAP11Q8TF27 550 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 LPGAT1Q92604 370 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 PKP4Q99569 1192 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 UTP23Q9BRU9 249 aaKnown RBP13.87□□□□□ -0.19
TRAF4-212ENST00000498540 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ENKD1Q9H0I2 346 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 MCCC2Q9HCC0 563 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 ABCF3Q9NUQ8 709 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 HCN3Q9P1Z3 774 aa13.87□□□□□ -0.19
TRAF4-212ENST00000498540 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 GOLGA8TH3BQL2 631 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 TXNDC9O14530 226 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 ADAM10O14672 748 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 ASNA1O43681 348 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 CCNDBP1O95273 360 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 MLYCDO95822 493 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 SLC16A8O95907 504 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 ABOP16442 354 aa13.86□□□□□ -0.19
TRAF4-212ENST00000498540 XCR1P46094 333 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms