RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CES4AQ5XG92 561 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 ATG16L1Q676U5 607 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 LETMD1Q6P1Q0 360 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 RNF44Q7L0R7 432 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 MILR1Q7Z6M3 343 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CUZD1Q86UP6 607 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 KRT78Q8N1N4 520 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CDYL2Q8N8U2 506 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 ZNF740Q8NDX6 193 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 RAB3IL1Q8TBN0 382 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 KLHL6Q8WZ60 621 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 TCTN2Q96GX1 697 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CNDP1Q96KN2 507 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 KCNA7Q96RP8 456 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 TRMOQ9BU70 441 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 FANCEQ9HB96 536 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 EML4Q9HC35 981 aaKnown RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 AKAP7Q9P0M2 348 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 TRPS1Q9UHF7 1281 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 NUP210LQ5VU65 1888 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 TRBC2A0A5B9 178 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 FAM149AA5PLN7 773 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 EFCAB7A8K855 629 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 UBFD1O14562 309 aaKnown RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 ITM2AO43736 263 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 OR1F1O43749 312 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 UGDHO60701 494 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 HGFP14210 728 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 JUPP14923 745 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 NELFEP18615 380 aaKnown RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 CXCR2P25025 360 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 ARRB2P32121 409 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 BCL6P41182 706 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 HNF4AP41235 474 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 SLC1A6P48664 564 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 ERVPABLB-1P60509 514 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 SH3BP2P78314 561 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 FOXM1Q08050 763 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 LAPTM5Q13571 262 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 TBCCQ15814 346 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 HIST2H2ACQ16777 129 aaPredicted RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 GGTA1PQ4G0N0 100 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 ZC3H12BQ5HYM0 836 aaKnown RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 C3orf38Q5JPI3 329 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 SH2D4BQ5SQS7 431 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 LIPJQ5W064 366 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 HIST2H2AA3Q6FI13 130 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 MED27Q6P2C8 311 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 AGBL5Q8NDL9 886 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 CCT6BQ92526 530 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 ZUFSPQ96AP4 578 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 GRAMD1AQ96CP6 724 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 WDR34Q96EX3 536 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 MAGEB10Q96LZ2 347 aaPredicted RBP13□□□□□ -0.33
CPNE1-227ENST00000498056 NTMT1Q9BV86 223 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 MANSC1Q9H8J5 431 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 PDP2Q9P2J9 529 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 LOXL2Q9Y4K0 774 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 KLK4Q9Y5K2 254 aa13□□□□□ -0.33
CPNE1-227ENST00000498056 SDK2Q58EX2 2172 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 TMX2-CTNND1H3BSU7 103 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 NDUFS4O43181 175 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 ESRRBO95718 433 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 SERPIND1P05546 499 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 ENO1P06733 434 aaKnown RBP12.99□□□□□ -0.33
CPNE1-227ENST00000498056 CAPN1P07384 714 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 PHEXP78562 749 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 PUM1Q14671 1186 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE1-227ENST00000498056 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
CPNE1-227ENST00000498056 TCHHL1Q5QJ38 904 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-227ENST00000498056 CLEC6AQ6EIG7 209 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 TMIGD1Q6UXZ0 262 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 LSMEM2Q8N112 164 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 D2HGDHQ8N465 521 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 L3MBTL4Q8NA19 623 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 OR4K1Q8NGD4 311 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 OR6Y1Q8NGX8 325 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 CKAP2Q8WWK9 683 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 ADAMTS14Q8WXS8 1223 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 REPS1Q96D71 796 aa12.99□□□□□ -0.33
CPNE1-227ENST00000498056 LIN37Q96GY3 246 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-227ENST00000498056 MAGEB18Q96M61 343 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms