RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 I3L1I5 382 aaPredicted RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 ZNF24P17028 368 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 PSMA3P25788 255 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 SLC1A1P43005 524 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 ATP5OP48047 213 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 SNRPNP63162 240 aaKnown RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 ADAM8P78325 824 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 TCEAL1Q15170 157 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 LRRC8BQ6P9F7 803 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 Q71RC1 249 aaPredicted RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 CD163Q86VB7 1156 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 KLHDC8BQ8IXV7 354 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 RPRMLQ8N4K4 120 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 CPSF7Q8N684 471 aaKnown RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 CSNK1A1LQ8N752 337 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 FAM98AQ8NCA5 519 aaKnown RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 HMGCLL1Q8TB92 370 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 STYXQ8WUJ0 223 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 CYTH2Q99418 400 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 SMR3AQ99954 134 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 RAB11FIP5Q9BXF6 653 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 VN1R1Q9GZP7 353 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 KCNJ16Q9NPI9 418 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 DNAJB12Q9NXW2 375 aaKnown RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 PPP2R2CQ9Y2T4 447 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 CSPG4Q6UVK1 2322 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 A0A1B0GTH9 108 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 GABRR3A8MPY1 467 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 IQCF5A8MTL0 148 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 TPOP07202 933 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 ANXA5P08758 320 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 PTGS2P35354 604 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 OC90Q02509 493 aaPredicted RBP15.53■□□□□ 0.08
VIM-208ENST00000497849 KIF5AQ12840 1032 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 POU6F1Q14863 301 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 ZNF468Q5VIY5 522 aaPredicted RBP15.53■□□□□ 0.08
VIM-208ENST00000497849 CCDC71Q8IV32 467 aaPredicted RBP15.53■□□□□ 0.08
VIM-208ENST00000497849 CCDC50Q8IVM0 306 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 ASZ1Q8WWH4 475 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 METTL21AQ8WXB1 218 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 RAD51AP1Q96B01 352 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 DPH7Q9BTV6 452 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 LZTFL1Q9NQ48 299 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 GNPTGQ9UJJ9 305 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 DNAJC13O75165 2243 aa15.53■□□□□ 0.08
VIM-208ENST00000497849 CCDC162PA2VCL2 907 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 OR2W5A6NFC9 320 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 APOC4-APOC2K7ER74 178 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 SPOPO43791 374 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 CTAG2O75638 210 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 SUN1O94901 812 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 APOC2P02655 101 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 CCDC175P0C221 793 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 BDKRB1P46663 353 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 MAPKAPK3Q16644 382 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 GARNL3Q5VVW2 1013 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 KCTD11Q693B1 232 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 TMEM211Q6ICI0 200 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 BBS12Q6ZW61 710 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 BIVMQ86UB2 503 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 ZNF227Q86WZ6 799 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 OLFM1Q99784 485 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 DRC3Q9H069 523 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 PIH1D1Q9NWS0 290 aaKnown RBP15.52■□□□□ 0.08
VIM-208ENST00000497849 TRMT1Q9NXH9 659 aaKnown RBP15.52■□□□□ 0.08
VIM-208ENST00000497849 LRFN1Q9P244 771 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 GUCA1BQ9UMX6 200 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 NFS1Q9Y697 457 aa15.52■□□□□ 0.08
VIM-208ENST00000497849 RTTNQ86VV8 2226 aa15.52■□□□□ 0.07
VIM-208ENST00000497849 MROH6A6NGR9 719 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 PROM1O43490 865 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 PSTPIP1O43586 416 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 KLK8O60259 260 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 NME2P1O60361 137 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 C1orf105O95561 183 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 NME2P22392 152 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 MARCKSL1P49006 195 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 ANKRD37Q7Z713 158 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 REXO1L1PQ8IX06 675 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 HORMAD2Q8N7B1 307 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 M1APQ8TC57 530 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 NANOS1Q8WY41 292 aaKnown RBP15.51■□□□□ 0.07
VIM-208ENST00000497849 RND1Q92730 232 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 SPATA13Q96N96 652 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 ALPK1Q96QP1 1244 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 OR2A5Q96R48 311 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 ACAT2Q9BWD1 397 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
VIM-208ENST00000497849 MMP25Q9NPA2 562 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 PLEKHA6Q9Y2H5 1048 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 ALG6Q9Y672 507 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 ZNF407Q9C0G0 2248 aa15.51■□□□□ 0.07
VIM-208ENST00000497849 IGKV1-8A0A0C4DH67 115 aa15.5■□□□□ 0.07
VIM-208ENST00000497849 GRID2IPA4D2P6 1211 aa15.5■□□□□ 0.07
VIM-208ENST00000497849 BTNL10A8MVZ5 291 aa15.5■□□□□ 0.07
VIM-208ENST00000497849 P2RX6O15547 441 aa15.5■□□□□ 0.07
VIM-208ENST00000497849 SLC25A12O75746 678 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms