RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TRPM3Q9HCF6 1732 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC12A8A0AV02 714 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 HMX2A2RU54 273 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 POM121CA8CG34 1229 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 WASH4PA8MWX3 477 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 KHNYNO15037 678 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 OGTO15294 1046 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 HPGDSO60760 199 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 STSP08842 583 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 CLUP10909 449 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 IL2RBP14784 551 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 TPH1P17752 444 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 MAN2A2P49641 1150 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 OGDHQ02218 1023 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 GRIN2CQ14957 1233 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 LARS2Q15031 903 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 HKDC1Q2TB90 917 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 DPP9Q86TI2 863 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 RAET1EQ8TD07 263 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 ELP5Q8TE02 316 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 ZBED3Q96IU2 234 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 TPD52L3Q96J77 140 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 GPR22Q99680 433 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 TMEM175Q9BSA9 504 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 AMBRA1Q9C0C7 1298 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 SMOC2Q9H3U7 446 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 SLC28A3Q9HAS3 691 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 CACYBPQ9HB71 228 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 CTSFQ9UBX1 484 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 TIAM2Q8IVF5 1701 aa7.96□□□□□ -1.14
CRNKL1-205ENST00000496549 MICAL3Q7RTP6 2002 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 TEX13CA0A0J9YWL9 993 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ANKRD28O15084 1053 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PAICSP22234 425 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 HSD17B7P56937 341 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 VSX2P58304 361 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 BTG1P62324 171 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 MAD2L1Q13257 205 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 GK2Q14410 553 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 EIF4HQ15056 248 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PFKFB4Q16877 469 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 FAM187BQ17R55 369 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 DPY19L1Q2PZI1 675 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 SAXO2Q658L1 398 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PTRH1Q86Y79 214 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 SULF1Q8IWU6 871 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 FBXO39Q8N4B4 442 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 MS4A15Q8N5U1 240 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 OLIG1Q8TAK6 271 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 FAM110BQ8TC76 370 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 KCNJ9Q92806 393 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 RFT1Q96AA3 541 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 KIF12Q96FN5 646 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 CELF6Q96J87 481 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 RIT2Q99578 217 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 CGRRF1Q99675 332 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ACTR6Q9GZN1 396 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 DLGAP4Q9Y2H0 992 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PCDHGB7Q9Y5F8 929 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 DNMT3AQ9Y6K1 912 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 RGPD1P0DJD0 1748 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 MITFO75030 526 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 HRGP04196 525 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 RAB4AP20338 218 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 SSTR4P31391 388 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ARRB2P32121 409 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 KIR2DL3P43628 341 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 CDH18Q13634 790 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PUM1Q14671 1186 aaKnown RBP eCLIP7.95□□□□□ -1.142e-6■■□□□ 14.5
CRNKL1-205ENST00000496549 PON3Q15166 354 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 OCLNQ16625 522 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ZCCHC12Q6PEW1 402 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 NT5DC4Q86YG4 428 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 GPR65Q8IYL9 337 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 RPLP0P6Q8NHW5 317 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 WDR48Q8TAF3 677 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ULK4Q96C45 1275 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 PGAP3Q96FM1 320 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 SRRQ9GZT4 340 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ABCG8Q9H221 673 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ALS2Q96Q42 1657 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 FXYD6-FXYD2A0A087WZ82 144 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ATG12O94817 140 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 MATN4O95460 622 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 GSRP00390 522 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 GOT2P00505 430 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 NFKB1P19838 968 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 FSHRP23945 695 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 MMP12P39900 470 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 JAK3P52333 1124 aa7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 HTRA4P83105 476 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 ILF3Q12906 894 aaKnown RBP eCLIP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 CBX2Q14781 532 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-205ENST00000496549 NTRK2Q16620 822 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms