RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 CDKN2DP55273 166 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ARL4CP56559 192 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 DR1Q01658 176 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 SP140Q13342 867 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 NAE1Q13564 534 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 RBM20Q5T481 1227 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 AGTRAPQ6RW13 159 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 C17orf64Q86WR6 236 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 KBTBD2Q8IY47 623 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ALKBH8Q96BT7 664 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 LINGO1Q96FE5 620 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 CFAP36Q96G28 342 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 PSMG3-AS1Q96PY0 264 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 NAPGQ99747 312 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 WDR77Q9BQA1 342 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 DRC3Q9H069 523 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ATG10Q9H0Y0 220 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 EPS8L2Q9H6S3 715 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 SYNPO2LQ9H987 977 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ZNF160Q9HCG1 818 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ASF1BQ9NVP2 202 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 RNF14Q9UBS8 474 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 NSG1A0A0A6YYJ2 146 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 BLACEA4D250 179 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 H0YIG0 161 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CCDC188H7C350 402 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 GP1BBP13224 206 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 NPPBP16860 134 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 GRK3P35626 688 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 Q0VFX4 171 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 HIF1AQ16665 826 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CRB2Q5IJ48 1285 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 HECTD2Q5U5R9 776 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CAPN13Q6MZZ7 669 aaPredicted RBP12.1□□□□□ -0.47
PTPRF-214ENST00000496043 LCTLQ6UWM7 567 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 ISLR2Q6UXK2 745 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 ARHGEF39Q8N4T4 335 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 AMER3Q8N944 861 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 GPATCH11Q8N954 259 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CAMKVQ8NCB2 501 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 PPP4R1Q8TF05 950 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 C8orf44Q96CB5 159 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 PWWP2AQ96N64 755 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 TEX264Q9Y6I9 313 aa12.1□□□□□ -0.47
PTPRF-214ENST00000496043 CYSRT1A8MQ03 144 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FFAR3O14843 346 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 GPR42O15529 346 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 P2RX6O15547 441 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 WFS1O76024 890 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 CBX6O95503 412 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 ICAM2P13598 275 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FDXRP22570 491 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 ITGA8P53708 1063 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 TBPL1P62380 186 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 MRPL49Q13405 166 aaKnown RBP12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FRG1Q14331 258 aaKnown RBP12.09□□□□□ -0.47
PTPRF-214ENST00000496043 STEAP4Q687X5 459 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FAAH2Q6GMR7 532 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 LINC00696Q6ZRV3 163 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 CUZD1Q86UP6 607 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 OR9A4Q8NGU2 314 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 SLC13A3Q8WWT9 602 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 ATL1Q8WXF7 558 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 TM4SF19Q96DZ7 209 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 SNF8Q96H20 258 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 PDLIM5Q96HC4 596 aaKnown RBP12.09□□□□□ -0.47
PTPRF-214ENST00000496043 MESP1Q9BRJ9 268 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 SGPP1Q9BX95 441 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 ARL15Q9NXU5 204 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
PTPRF-214ENST00000496043 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
PTPRF-214ENST00000496043 RP1L1Q8IWN7 2480 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 IGHV1-45A0A0A0MS14 117 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 FEZF1A0PJY2 475 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 EFCAB8A8MWE9 144 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 NDC80O14777 642 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TTI1O43156 1089 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 LCMT2O60294 686 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 KLHL18O94889 574 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 SEC31AO94979 1220 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 BMP10O95393 424 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms