RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 HOXC5Q00444 222 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 FGL1Q08830 312 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 TUSC1Q2TAM9 212 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 CARD16Q5EG05 197 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ANKRD34AQ69YU3 496 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 CLEC6AQ6EIG7 209 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ESRP1Q6NXG1 681 aaKnown RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 CES3Q6UWW8 571 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 AHSA2Q719I0 299 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 PDZD4Q76G19 769 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 C16orf62Q7Z3J2 963 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 LAX1Q8IWV1 398 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 MSRB3Q8IXL7 192 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ADGRF3Q8IZF5 1079 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 OR8H3Q8N146 312 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 SLAIN1Q8ND83 568 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 BVESQ8NE79 360 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 TMEM163Q8TC26 289 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 CLEC4DQ8WXI8 215 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 SLC9A6Q92581 669 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ZBED6CLQ96FA7 236 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 FERD3LQ96RJ6 166 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ATOH8Q96SQ7 321 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF436Q9C0F3 470 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 C8orf33Q9H7E9 229 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-210ENST00000494667 IL1RL2Q9HB29 575 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 HHATLQ9HCP6 504 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 ATP13A1Q9HD20 1204 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 FAM198AQ9UFP1 575 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 PCDHA10Q9Y5I2 948 aa4.65□□□□□ -1.66
PRKD3-210ENST00000494667 GREB1Q4ZG55 1949 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 E2F8A0AVK6 867 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 UBA6A0AVT1 1052 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 C2orf81A6NN90 581 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 KPNA3O00505 521 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 FABP7O15540 132 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 LYRM1O43325 122 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 MITFO75030 526 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PEX14O75381 377 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 RAD17O75943 681 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 CCNDBP1O95273 360 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 MT-ND1P03886 318 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 DNTTP04053 509 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ANXA3P12429 323 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 MTHFD2P13995 350 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ACPPP15309 386 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 CD1DP15813 335 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PAMP19021 973 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 MAPK1P28482 360 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 GSTM5P46439 218 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 HSPA7P48741 367 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ARHGDIAP52565 204 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 EPHA5P54756 1037 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 EN1Q05925 392 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 CAMK2DQ13557 499 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 STXBP2Q15833 593 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SMN1Q16637 294 aaKnown RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 LGALSLQ3ZCW2 172 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ANKS6Q68DC2 871 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PRICKLE2Q7Z3G6 844 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 LRRTM3Q86VH5 581 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PGBD5Q8N414 524 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 NAT16Q8N8M0 369 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 GPR150Q8NGU9 434 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 AP3S1Q92572 193 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 DACT3Q96B18 629 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 LGMNQ99538 433 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ASPNQ9BXN1 380 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SLC25A19Q9HC21 320 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 GPATCH2LQ9NWQ4 482 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SIX4Q9UIU6 781 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 TMEM5Q9Y2B1 443 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 TMX2Q9Y320 296 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PHIPQ8WWQ0 1821 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 LCTP09848 1927 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 A0A0U1RQF3 1178 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SLC12A8A0AV02 714 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 NEMP2A6NFY4 417 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 NPIPB8E9PQR5 432 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 G3V3Q6 166 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 M0QYV0 167 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 APOL3O95236 402 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ICAM1P05362 532 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SRCP12931 536 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 GALP22466 123 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 WARSP23381 471 aaKnown RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PSMA3P25788 255 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 PAX6P26367 422 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 RORAP35398 523 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ARL4AP40617 200 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 EFNA5P52803 228 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 RAB14P61106 215 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 UFM1P61960 85 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 SNRPD2P62316 118 aaKnown RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 CYP4F8P98187 520 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 ACVR1Q04771 509 aa4.65□□□□□ -1.67
PRKD3-210ENST00000494667 MLLT11Q13015 90 aaPredicted RBP4.65□□□□□ -1.67
PRKD3-210ENST00000494667 BTN1A1Q13410 526 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms