RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 IL16Q14005 1332 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 TRBV4-1A0A0J9YWV2 114 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 PI4K2BG5E9Z4 385 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 FYNP06241 537 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 THEGLP0DJG4 465 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 GATA2P23769 480 aaPredicted RBP4.3□□□□□ -1.72
NCL-210ENST00000494618 AZGP1P25311 298 aaKnown RBP4.3□□□□□ -1.72
NCL-210ENST00000494618 PDHA2P29803 388 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 PTGER3P43115 390 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 RAD52P43351 418 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 PGFP49763 221 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 DCDC1P59894 354 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 IRX4P78413 519 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 DLK1P80370 383 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 PAX8Q06710 450 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 FGD3Q5JSP0 725 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 LCLAT1Q6UWP7 414 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 SLC24A5Q71RS6 500 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 KRT74Q7RTS7 529 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 LMNTD2Q8IXW0 634 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 SPAG16Q8N0X2 631 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 GPC2Q8N158 579 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 AQP11Q8NBQ7 271 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 ATP8B4Q8TF62 1192 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 ZNF558Q96NG5 402 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 SOSTQ9BQB4 213 aa4.3□□□□□ -1.72
NCL-210ENST00000494618 GPN1Q9HCN4 374 aaPredicted RBP4.3□□□□□ -1.72
NCL-210ENST00000494618 SLC1A7O00341 560 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 SLCO2B1O94956 709 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 GGPS1O95749 300 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 HPRP00739 348 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 ERCC2P18074 760 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 AADACP22760 399 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 EEF1DP29692 281 aaKnown RBP4.29□□□□□ -1.72
NCL-210ENST00000494618 SFTPDP35247 375 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 CAPGP40121 348 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 NOVP48745 357 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 DHODHQ02127 395 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 RIGQ13278 110 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 IL17RELQ6ZVW7 336 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 ZFAND4Q86XD8 727 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 CDC20BQ86Y33 519 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 MIPOL1Q8TD10 442 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 CHURC1Q8WUH1 139 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 ATXN7L3BQ96GX2 97 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 RAB11FIP5Q9BXF6 653 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 RNF121Q9H920 327 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 ANKEF1Q9NU02 776 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 WDR35Q9P2L0 1181 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 TTLL3Q9Y4R7 772 aa4.29□□□□□ -1.72
NCL-210ENST00000494618 HMGB1P1B2RPK0 211 aaPredicted RBP4.28□□□□□ -1.72
NCL-210ENST00000494618 IGHV3-13P01766 116 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 ALDH1B1P30837 517 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 HSPA4P34932 840 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 UBASH3AP57075 661 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 SRSF9Q13242 221 aaKnown RBP eCLIP4.28□□□□□ -1.722e-43■■■■□ 23
NCL-210ENST00000494618 RBBP7Q16576 425 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 TCP11X2Q5H9J9 407 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 ENPP7Q6UWV6 458 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 Q8N377 158 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 PI4KAP1Q8N8J0 262 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 GBP7Q8N8V2 638 aaPredicted RBP4.28□□□□□ -1.72
NCL-210ENST00000494618 RMDN1Q96DB5 314 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 FOXN4Q96NZ1 517 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 KLHL5Q96PQ7 755 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 FN3KQ9H479 309 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 RABEP2Q9H5N1 569 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 TBC1D13Q9NVG8 400 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 NKIRAS2Q9NYR9 191 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 IL36AQ9UHA7 158 aa4.28□□□□□ -1.72
NCL-210ENST00000494618 SURF4O15260 269 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 P4HA2O15460 535 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 DIAPH2O60879 1101 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 LUC7L3O95232 432 aaKnown RBP4.27□□□□□ -1.73
NCL-210ENST00000494618 CAPN2P17655 700 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 CSRP3P50461 194 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 CACNG1Q06432 222 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 FAM189A2Q15884 450 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 PTGISQ16647 500 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 KYNUQ16719 465 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 LACTB2Q53H82 288 aaPredicted RBP4.27□□□□□ -1.73
NCL-210ENST00000494618 CYB5D1Q6P9G0 228 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 GDPGP1Q6ZNW5 385 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 AMIGO1Q86WK6 493 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 TCEANCQ8N8B7 351 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 CAMKVQ8NCB2 501 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 EXT2Q93063 718 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 CNRIP1Q96F85 164 aaPredicted RBP4.27□□□□□ -1.73
NCL-210ENST00000494618 GTPBP2Q9BX10 602 aaKnown RBP4.27□□□□□ -1.73
NCL-210ENST00000494618 SNX25Q9H3E2 840 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 CCDC177Q9NQR7 707 aaPredicted RBP4.27□□□□□ -1.73
NCL-210ENST00000494618 PKD2L2Q9NZM6 624 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 HACD3Q9P035 362 aa4.27□□□□□ -1.73
NCL-210ENST00000494618 NPHP3Q7Z494 1330 aa4.26□□□□□ -1.73
NCL-210ENST00000494618 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms