RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 TRMT10BQ6PF06 316 aaKnown RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 CYHR1Q6ZMK1 362 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 PIWIL4Q7Z3Z4 852 aaKnown RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 CTAGE3PQ8IX95 158 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 TTC29Q8NA56 475 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZNF473Q8WTR7 871 aaKnown RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZNF480Q8WV37 535 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 CKAP2Q8WWK9 683 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 IP6K3Q96PC2 410 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZNF317Q96PQ6 595 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 NDNQ99608 321 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZFYVE21Q9BQ24 234 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 SMYD2Q9NRG4 433 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 GPN3Q9UHW5 284 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-209ENST00000494464 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
ERCC3-209ENST00000494464 ARGFXA6NJG6 315 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 CXorf49A8MYA2 514 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 FOXO6A8MYZ6 492 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TM9SF1O15321 606 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 CEACAM4O75871 244 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 DNAJB5O75953 348 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 AHSGP02765 367 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 SNRPAP09012 282 aaKnown RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 KRT4P19013 534 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ITGAXP20702 1163 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 IMPA1P29218 277 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 FOLR3P41439 243 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 RGS4P49798 205 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 SEC24CP53992 1094 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 RELAQ04206 551 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 MGAT5Q09328 741 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TEDDM1Q5T9Z0 273 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 FAM69BQ5VUD6 431 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 MLIPQ5VWP3 458 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ICE2Q659A1 982 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 FRMPD2BQ6IN97 320 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ZNF425Q6IV72 752 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 SUSD1Q6UWL2 747 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TIFABQ6ZNK6 161 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TTLL10Q6ZVT0 673 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 UBE2R2Q712K3 238 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 MRGPREQ86SM8 312 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 PTRH1Q86Y79 214 aaKnown RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 LRRC56Q8IYG6 542 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ANKRD42Q8N9B4 389 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TMEM102Q8N9M5 508 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 OR2Y1Q8NGV0 311 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 DYDC1Q8WWB3 177 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
ERCC3-209ENST00000494464 APOPT1Q96IL0 206 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 PLCD4Q9BRC7 762 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 DPH7Q9BTV6 452 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ACAT2Q9BWD1 397 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ING2Q9H160 280 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 WDR54Q9H977 334 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 ACSS2Q9NR19 701 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 TAC3Q9UHF0 121 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
ERCC3-209ENST00000494464 IGKV1-8A0A0C4DH67 115 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 A0A0J9YVX5 310 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 A0A1W2PPM1 405 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 NRP2O60462 931 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 CNOT3O75175 753 aaKnown RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 ALBP02768 609 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 C8GP07360 202 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 EZRP15311 586 aaKnown RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 DRD4P21917 467 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 CASRP41180 1078 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 EMP3P54852 163 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 RRADP55042 308 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 CDKN2DP55273 166 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 VSX2P58304 361 aaPredicted RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 YBX1P67809 324 aaKnown RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 ABATP80404 500 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 PRDX1Q06830 199 aaKnown RBP12.6□□□□□ -0.39
ERCC3-209ENST00000494464 KLRB1Q12918 225 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 SSPNQ14714 243 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 FAM45BPQ6NSW5 357 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 RGS9BPQ6ZS82 235 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 MED25Q71SY5 747 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 COX15Q7KZN9 410 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 PAQR7Q86WK9 346 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 C4orf33Q8N1A6 199 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 BANPQ8N9N5 519 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 FAM45AQ8TCE6 357 aa12.6□□□□□ -0.39
ERCC3-209ENST00000494464 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms