RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 OR4K3Q96R72 315 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 ZFYVE21Q9BQ24 234 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 RHOXF2Q9BQY4 288 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 EPB41L4BQ9H329 900 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 ACTR5Q9H9F9 607 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-217ENST00000494395 GPN2Q9H9Y4 310 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-217ENST00000494395 MRPS30Q9NP92 439 aaKnown RBP8.39□□□□□ -1.07
ITGB1-217ENST00000494395 CCDC177Q9NQR7 707 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-217ENST00000494395 TXNDC16Q9P2K2 825 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 PADI1Q9ULC6 663 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 NFU1Q9UMS0 254 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 OARD1Q9Y530 152 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 MRPS18BQ9Y676 258 aaKnown RBP8.39□□□□□ -1.07
ITGB1-217ENST00000494395 FAM208BQ5VWN6 2430 aa8.39□□□□□ -1.07
ITGB1-217ENST00000494395 NUP210LQ5VU65 1888 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 LOC105369274A0A096LPK9 316 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 LOC102723532A0A0G2JNH3 316 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 C21orf140B9A014 251 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 HAT1O14929 419 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 SRPX2O60687 465 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CCNDBP1O95273 360 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 MED26O95402 600 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ACSL3O95573 720 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ONECUT2O95948 504 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 FURINP09958 794 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 RAB40ALP0C0E4 278 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 FAM153BP0C7A2 387 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CCDC166P0CW27 439 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CD1DP15813 335 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 NPPBP16860 134 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 STMN1P16949 149 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 TCN2P20062 427 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CCND1P24385 295 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PHBP35232 272 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 DLSTP36957 453 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 RAB10P61026 200 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ABATP80404 500 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PLAURQ03405 335 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 NAE1Q13564 534 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 DNASE1L3Q13609 305 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PRTGQ2VWP7 1150 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PTCHD3Q3KNS1 767 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 FAM153CQ494X1 144 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PRAMEF13Q5VWM6 474 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 TLDC1Q6P9B6 456 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 LCTLQ6UWM7 567 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CMC1Q7Z7K0 106 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ADAMTSL2Q86TH1 951 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 IFT20Q8IY31 132 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 KLHDC8AQ8IYD2 350 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 GPR135Q8IZ08 494 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 OR4N4Q8N0Y3 316 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ZNF655Q8N720 491 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-217ENST00000494395 STARD8Q92502 1023 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ISL2Q96A47 359 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 KIAA1143Q96AT1 154 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-217ENST00000494395 PTERQ96BW5 349 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 TSPAN17Q96FV3 270 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 BBC3Q96PG8 261 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-217ENST00000494395 GBP5Q96PP8 586 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 OR2A5Q96R48 311 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CYTH2Q99418 400 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 EFHD1Q9BUP0 239 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ATG10Q9H0Y0 220 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CHST8Q9H2A9 424 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 SLC22A11Q9NSA0 550 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ARL15Q9NXU5 204 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 RALYQ9UKM9 306 aaKnown RBP8.38□□□□□ -1.07
ITGB1-217ENST00000494395 SRPK3Q9UPE1 567 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 AP1M2Q9Y6Q5 423 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 ZFYVE26Q68DK2 2539 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
ITGB1-217ENST00000494395 A0A0J9YVX5 310 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 ZNF891A8MT65 544 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 CNOT3O75175 753 aaKnown RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 GUCA1CO95843 209 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 ALDOAP04075 364 aaKnown RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 KLK3P07288 261 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 ABHD2P08910 425 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 HBQ1P09105 142 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 HIST1H2AGP0C0S8 130 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 EZRP15311 586 aaKnown RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 HIST1H2ADP20671 130 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 HRH2P25021 359 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 GCAP28676 217 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 TNFRSF8P28908 595 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 PTPN4P29074 926 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 SLC26A3P40879 764 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 MAGEA12P43365 314 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 SLC6A12P48065 614 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 KCNC1P48547 511 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 SLC12A2P55011 1212 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 RPS18P62269 152 aaKnown RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 SNRPNP63162 240 aaKnown RBP8.37□□□□□ -1.07
ITGB1-217ENST00000494395 CYP4F2P78329 520 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 CSNK1G2P78368 415 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 RHDQ02161 417 aa8.37□□□□□ -1.07
ITGB1-217ENST00000494395 CDC20Q12834 499 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms