RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 FOXS1O43638 330 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 C8GP07360 202 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 HEXBP07686 556 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 COX6A1P12074 109 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 EEF1A2Q05639 463 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 DHX9Q08211 1270 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 FAM53BQ14153 422 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 TLR1Q15399 786 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 LINC00696Q6ZRV3 163 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 NDUFAF7Q7L592 441 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 PCGF5Q86SE9 256 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 PALM2Q8IXS6 379 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 MYO1HQ8N1T3 1032 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 ARHGEF39Q8N4T4 335 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 MCOLN3Q8TDD5 553 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 CCDC138Q96M89 665 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 PRAP1Q96NZ9 151 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 BARD1Q99728 777 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 NAT9Q9BTE0 207 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 TGIF2Q9GZN2 237 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 DDX47Q9H0S4 455 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 TMEM184CQ9NVA4 438 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 RIC8BQ9NVN3 520 aa22.49■■□□□ 1.19
RHBDD3-206ENST00000493894 A0A1W2PQ72 361 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 RNF224P0DH78 156 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 FDXRP22570 491 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 AVPR1BP47901 424 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 RPS15AP62244 130 aaKnown RBP22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 CDC16Q13042 620 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 SPANXN3Q5MJ09 141 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 EEF1AKMT1Q8WVE0 214 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 SLCO2A1Q92959 643 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 PCBD2Q9H0N5 130 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 ADAMTS6Q9UKP5 1117 aa22.48■■□□□ 1.19
RHBDD3-206ENST00000493894 IGHV1-45A0A0A0MS14 117 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 BANF1O75531 89 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 UQCRHP07919 91 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 FAAH2Q6GMR7 532 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 KIAA0408Q6ZU52 694 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 ZC3H7AQ8IWR0 971 aaKnown RBP22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 CNTN4Q8IWV2 1026 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 CERS2Q96G23 380 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 LMF1Q96S06 567 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 PDE10AQ9Y233 779 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 ICE1Q9Y2F5 2266 aa22.47■■□□□ 1.19
RHBDD3-206ENST00000493894 H0YIG0 161 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 KLHL18O94889 574 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 SERPINA7P05543 415 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 PRR35P0CG20 571 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 TCP1P17987 556 aaKnown RBP22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 CCND1P24385 295 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 MAT1AQ00266 395 aaKnown RBP22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 SYT16Q17RD7 645 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 BBS9Q3SYG4 887 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 C4orf17Q53FE4 359 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 AGTRAPQ6RW13 159 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 ST6GALNAC3Q8NDV1 305 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 PARVBQ9HBI1 364 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 ERRFI1Q9UJM3 462 aaPredicted RBP22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 MKL2Q9ULH7 1088 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 UTP20O75691 2785 aaKnown RBP22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 HIVEP3Q5T1R4 2406 aa22.46■■□□□ 1.19
RHBDD3-206ENST00000493894 PABPN1LA6NDY0 278 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 SLC16A5O15375 505 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 STATHP02808 62 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 ARG2P78540 354 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 TIAL1Q01085 375 aaKnown RBP eCLIP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 RBM20Q5T481 1227 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 PAQR3Q6TCH7 311 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 MBOAT1Q6ZNC8 495 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 VN1R4Q7Z5H5 301 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 C17orf64Q86WR6 236 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 BRIX1Q8TDN6 353 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 GRHL3Q8TE85 626 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 THAP11Q96EK4 314 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 LINGO1Q96FE5 620 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 C5orf34Q96MH7 638 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 TRMT1Q9NXH9 659 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 PTGFRNQ9P2B2 879 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 SLC5A6Q9Y289 635 aa22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 MRPS2Q9Y399 296 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-206ENST00000493894 KCNE1BA0A087WTH5 132 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 LOC102723996A0A087X1L8 192 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 A1L4Q6 167 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 DYTNA2CJ06 578 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 NSA2O95478 260 aaKnown RBP22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 HIST1H2AGP0C0S8 130 aaPredicted RBP22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 HIST1H2ADP20671 130 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 GABRB3P28472 473 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 SOX11P35716 441 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 CDKN2DP55273 166 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 AP2B1P63010 937 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 CSNK1G2P78368 415 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 PDAP1Q13442 181 aaKnown RBP22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 MSS51Q4VC12 460 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 FAM180AQ6UWF9 173 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 RIPOR1Q6ZS17 1223 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 GALNT7Q86SF2 657 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 CAMKVQ8NCB2 501 aa22.44■■□□□ 1.18
RHBDD3-206ENST00000493894 OR9A4Q8NGU2 314 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms