RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MARCKSL1P49006 195 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GLUD2P49448 558 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 IDH3GP51553 393 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 HSD11B2P80365 405 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GTF2BQ00403 316 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 CNTN2Q02246 1040 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ST3GAL3Q11203 375 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ECH1Q13011 328 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 NTRK2Q16620 822 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ODF4Q2M2E3 257 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF674Q2M3X9 581 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ADGRD1Q6QNK2 874 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZC3HC1Q86WB0 502 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 LRRC52Q8N7C0 313 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF781Q8N8C0 355 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 SPPL2BQ8TCT7 592 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GPR152Q8TDT2 470 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 LPPQ93052 612 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 WDR77Q9BQA1 342 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 OR2S2Q9NQN1 319 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RNF19AQ9NV58 838 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ASB6Q9NWX5 421 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ICKQ9UPZ9 632 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PCDHB11Q9Y5F2 797 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 SAMD9LQ8IVG5 1584 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 DIRAS3O95661 229 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PLATP00750 562 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 JUNP05412 331 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 FCER2P06734 321 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 WASP42768 502 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 INAVAQ3KP66 663 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 TBRG1Q3YBR2 411 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PPM1JQ5JR12 505 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 AKR1C8PQ5T2L2 129 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PLPP4Q5VZY2 271 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 MFSD5Q6N075 450 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RBM23Q86U06 439 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ASCC1Q8N9N2 400 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RGMAQ96B86 450 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 C7orf50Q9BRJ6 194 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 C12orf65Q9H3J6 166 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 BIN3Q9NQY0 253 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZCCHC3Q9NUD5 404 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 CNTN3Q9P232 1028 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 COPZ2Q9P299 210 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 MRPS17Q9Y2R5 130 aaKnown RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ADAM18Q9Y3Q7 739 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GRID2O43424 1007 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 CLN5O75503 358 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 TRAPPC6AO75865 159 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PRPS1L1P21108 318 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 NDUFS1P28331 727 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RHDQ02161 417 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 DECR1Q16698 335 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF404Q494X3 552 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 NOXRED1Q6NXP6 359 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 TMPRSS9Q7Z410 1059 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF619Q8N2I2 560 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF283Q8N7M2 679 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 DCBLD1Q8N8Z6 715 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF578Q96N58 590 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RBP7Q96R05 134 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PHOX2BQ99453 314 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 CD180Q99467 661 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 BEX2Q9BXY8 128 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 ACTR6Q9GZN1 396 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 BEX1Q9HBH7 125 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 CHRAC1Q9NRG0 131 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 GTF2IRD1Q9UHL9 959 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 RNF6Q9Y252 685 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 DNMT3AQ9Y6K1 912 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-221ENST00000493795 NEO1Q92859 1461 aa7.66□□□□□ -1.18
BRCA1-221ENST00000493795 MYPNQ86TC9 1320 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 C12orf71A8MTZ7 269 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 INSIG1O15503 277 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 GMDSO60547 372 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 MAFO75444 373 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-221ENST00000493795 AHSA1O95433 338 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 GNSP15586 552 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 CDK2P24941 298 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 GRM5P41594 1212 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 CRYBB1P53674 252 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-221ENST00000493795 DHCR24Q15392 516 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 TAF1AQ15573 450 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-221ENST00000493795 MOGQ16653 247 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 RALGPS1Q5JS13 557 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 DUS1LQ6P1R4 473 aaKnown RBP7.65□□□□□ -1.18
BRCA1-221ENST00000493795 LINC00116Q8NCU8 138 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 IRGQQ8WZA9 623 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 SLC25A44Q96H78 314 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-221ENST00000493795 CSPG4P5Q96PW8 444 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 ALPK1Q96QP1 1244 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 CYP2S1Q96SQ9 504 aa7.65□□□□□ -1.18
BRCA1-221ENST00000493795 OR51I1Q9H343 314 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms