RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SARGQ9BW04 601 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 ILKAPQ9H0C8 392 aaPredicted RBP11.94□□□□□ -0.5
SNX17-208ENST00000493711 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
SNX17-208ENST00000493711 ZBTB26Q9HCK0 441 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 TRPS1Q9UHF7 1281 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 SNX6Q9UNH7 406 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 BTRCQ9Y297 605 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 TSC22D4Q9Y3Q8 395 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 PCDHGA11Q9Y5H2 935 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
SNX17-208ENST00000493711 KCNE1BA0A087WTH5 132 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 IGHV5-10-1A0A0J9YXX1 117 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SLC9B1P1A6NJY1 282 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SLCO1B7G3V0H7 640 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 H0YIV9 168 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 H7BY64 318 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 TXNDC9O14530 226 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SRPX2O60687 465 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 SNNO75324 88 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 KRT6AP02538 564 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 KRT6BP04259 564 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 FGF4P08620 206 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 THRAP10827 490 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 HGFP14210 728 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 NELFEP18615 380 aaKnown RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 EPORP19235 508 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 MAGP20916 626 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 CCKBRP32239 447 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 AHRP35869 848 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 KRT6CP48668 564 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 INHBCP55103 352 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 GFERP55789 205 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 CSNK1G2P78368 415 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 REEP5Q00765 189 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 ZFP36L1Q07352 338 aaKnown RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 BST1Q10588 318 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 TRAF3Q13114 568 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 MED27Q6P2C8 311 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 TMIGD1Q6UXZ0 262 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 ZCCHC23Q6ZST2 131 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 ARHGAP22Q7Z5H3 698 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 CUZD1Q86UP6 607 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 TRIM73Q86UV7 250 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 BPHLQ86WA6 291 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 PAQR7Q86WK9 346 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 SLITRK4Q8IW52 837 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 ZNF655Q8N720 491 aaPredicted RBP11.93□□□□□ -0.5
SNX17-208ENST00000493711 OR8K5Q8NH50 307 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 PRAP1Q96NZ9 151 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 CCT7Q99832 543 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 CCDC134Q9H6E4 229 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SLC6A20Q9NP91 592 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 MID1IP1Q9NPA3 183 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 SOHLH2Q9NX45 425 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 HAO1Q9UJM8 370 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 RAP2CQ9Y3L5 183 aa11.93□□□□□ -0.5
SNX17-208ENST00000493711 IGKV1-8A0A0C4DH67 115 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 UROSP10746 265 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 ST6GAL1P15907 406 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 HMOX2P30519 316 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CSTF2P33240 577 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX17-208ENST00000493711 PIK3CBP42338 1070 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 LSSP48449 732 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 PPP1CAP62136 330 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 SH3BP2P78314 561 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 ACY1Q03154 408 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 IFT88Q13099 833 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX17-208ENST00000493711 CCDC157Q569K6 752 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 SNAP47Q5SQN1 464 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CATSPEREQ5SY80 951 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 PHF19Q5T6S3 580 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CDCP2Q5VXM1 449 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 TTC19Q6DKK2 380 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 FCRL6Q6DN72 434 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 ZNF574Q6ZN55 896 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 SYVN1Q86TM6 617 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 TMPRSS12Q86WS5 348 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 LAS2Q8IYD9 372 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CLYBLQ8N0X4 340 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 D2HGDHQ8N465 521 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 AGBL5Q8NDL9 886 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 TRPV3Q8NET8 790 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 OR4F6Q8NGB9 312 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 OR52B6Q8NGF0 335 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 METTL6Q8TCB7 284 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 N4BP2L2Q92802 583 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 RERGQ96A58 199 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 CCDC74BQ96LY2 380 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 ZFYVE21Q9BQ24 234 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 NLNQ9BYT8 704 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 FANCEQ9HB96 536 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CUEDC1Q9NWM3 386 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms