RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 KLF11O14901 512 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 CRCPO75575 148 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 ESRRBO95718 433 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 BGNP21810 368 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 AHRP35869 848 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
LSM2-214ENST00000493387 PHEXP78562 749 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 TRAF3Q13114 568 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
LSM2-214ENST00000493387 ZIC1Q15915 447 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 GRHL2Q6ISB3 625 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 FBXO42Q6P3S6 717 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 TMIGD1Q6UXZ0 262 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 B3GNT8Q7Z7M8 397 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 MYLK4Q86YV6 388 aaPredicted RBP11.08□□□□□ -0.64
LSM2-214ENST00000493387 MCATQ8IVS2 390 aaKnown RBP11.08□□□□□ -0.64
LSM2-214ENST00000493387 DNAJC22Q8N4W6 341 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 MFSD9Q8NBP5 474 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 LRRC8CQ8TDW0 803 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 RERGQ96A58 199 aaPredicted RBP11.08□□□□□ -0.64
LSM2-214ENST00000493387 NLNQ9BYT8 704 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 SLC29A3Q9BZD2 475 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 KLHL25Q9H0H3 589 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 MID1IP1Q9NPA3 183 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 THAP1Q9NVV9 213 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
LSM2-214ENST00000493387 SERTAD3Q9UJW9 196 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 PILRAQ9UKJ1 303 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 KLHL20Q9Y2M5 609 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 TSC22D4Q9Y3Q8 395 aa11.08□□□□□ -0.64
LSM2-214ENST00000493387 VPS13AQ96RL7 3174 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 B4E171 279 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 H0YIV9 168 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 HAT1O14929 419 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 CASC3O15234 703 aaKnown RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 OR1F1O43749 312 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 HSPA4LO95757 839 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 KRT6AP02538 564 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 KRT6BP04259 564 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 HGFP14210 728 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 VARSP26640 1264 aaKnown RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 TSPAN7P41732 249 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 SCTRP47872 440 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 SLC1A6P48664 564 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 KRT6CP48668 564 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 ATP1A2P50993 1020 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 PDX1P52945 283 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 YBX1P67809 324 aaKnown RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 ZNF33BQ06732 778 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 IL11RAQ14626 422 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 RBBP5Q15291 538 aaKnown RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 ARL13AQ5H913 290 aaPredicted RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 TCTE1Q5JU00 501 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 MANEAQ5SRI9 462 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 TTC19Q6DKK2 380 aaPredicted RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 ZCCHC23Q6ZST2 131 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 TMPRSS7Q7RTY8 843 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 LAS2Q8IYD9 372 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 AFAP1L2Q8N4X5 818 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 ZNF655Q8N720 491 aaPredicted RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 RCBTB1Q8NDN9 531 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 TRPV3Q8NET8 790 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 OR4F6Q8NGB9 312 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 OR52B6Q8NGF0 335 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 AGAP11Q8TF27 550 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 CKAP2Q8WWK9 683 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 ZNF75CPQ92670 426 aaPredicted RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 MAGEB18Q96M61 343 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 ILKAPQ9H0C8 392 aaPredicted RBP11.07□□□□□ -0.64
LSM2-214ENST00000493387 RHBGQ9H310 441 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 FAM60AQ9NP50 221 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 SNX6Q9UNH7 406 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 RNF11Q9Y3C5 154 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 HEATR5BQ9P2D3 2071 aa11.07□□□□□ -0.64
LSM2-214ENST00000493387 ZNF292O60281 2723 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 A0A0J9YVX5 310 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 ANKDD1BA6NHY2 528 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 EFCAB7A8K855 629 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 PRAMEF4O60810 478 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 CTSVO60911 334 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 OR4F21O95013 312 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 CHEK2O96017 543 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 FGF4P08620 206 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 UROSP10746 265 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 TSPAN8P19075 237 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 HMOX2P30519 316 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 PIK3CBP42338 1070 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 ID4P47928 161 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 RAB15P59190 212 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 ERVPABLB-1P60509 514 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 SH3BP2P78314 561 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 MC2RQ01718 297 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 BST1Q10588 318 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 IFT88Q13099 833 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 PWP1Q13610 501 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 C16orf72Q14CZ0 275 aa11.06□□□□□ -0.64
LSM2-214ENST00000493387 ZRSR2Q15696 482 aaKnown RBP11.06□□□□□ -0.64
LSM2-214ENST00000493387 CPSF6Q16630 551 aaKnown RBP eCLIP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms