RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CSO75390 466 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CCNKO75909 580 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ABHD16AO95870 558 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TNNC2P02585 160 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 C1SP09871 688 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 XRCC1P18887 633 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 UGT1A6P19224 532 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TGM2P21980 687 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 DTYMKP23919 212 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CRABP1P29762 137 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SLC8A1P32418 973 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TGFBR2P37173 567 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SLCO1A2P46721 670 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 OMPP47874 163 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PTDSS1P48651 473 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TGM4P49221 684 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RGS4P49798 205 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 HTR6P50406 440 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CCR8P51685 355 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 HNRNPMP52272 730 aaKnown RBP eCLIP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ATP5J2P56134 94 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 GPC5P78333 572 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CDK16Q00536 496 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NHLH1Q02575 133 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ILKQ13418 452 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FLOT2Q14254 428 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SLC29A2Q14542 456 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 GRM7Q14831 915 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SLC15A2Q16348 729 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 DPY19L1Q2PZI1 675 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ANKRD55Q3KP44 614 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 AMZ1Q400G9 498 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CHRFAM7AQ494W8 412 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RAET1LQ5VY80 246 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 HMBOX1Q6NT76 420 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 KIAA1324Q6UXG2 1013 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM182Q6ZP80 229 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 STOX1Q6ZVD7 989 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PGAP1Q75T13 922 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SMIM15Q7Z3B0 74 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TECPR1Q7Z6L1 1165 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CENPVQ7Z7K6 275 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 KLBQ86Z14 1044 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RASGRP3Q8IV61 690 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FAM219AQ8IW50 185 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 FIBCD1Q8N539 461 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ABHD11Q8NFV4 315 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 OR4D6Q8NGJ1 314 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 OR13C9Q8NGT0 318 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NUDT8Q8WV74 236 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 MAP4K1Q92918 833 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SNRNP40Q96DI7 357 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PTCD3Q96EY7 689 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 MAP6Q96JE9 813 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 LRR1Q96L50 414 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 MRGPRX4Q96LA9 322 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 SENP8Q96LD8 212 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RNF145Q96MT1 663 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PANX3Q96QZ0 392 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 DIRC2Q96SL1 478 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 KRT12Q99456 494 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CTRCQ99895 268 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 APOL2Q9BQE5 337 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM47Q9BQJ4 181 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 C11orf84Q9BUA3 381 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ALG12Q9BV10 488 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 OR2B2Q9GZK3 357 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CLEC4MQ9H2X3 399 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 TOR3AQ9H497 397 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NXF3Q9H4D5 531 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF768Q9H5H4 540 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 CNOT10Q9H9A5 744 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 VIPAS39Q9H9C1 493 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ROPN1Q9HAT0 212 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 LPAR2Q9HBW0 351 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 LRRC4Q9HBW1 653 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF160Q9HCG1 818 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ACSS2Q9NR19 701 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 POT1Q9NUX5 634 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 GPATCH2Q9NW75 528 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RMND1Q9NWS8 449 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ZDHHC3Q9NYG2 299 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PIM2Q9P1W9 311 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 HCN3Q9P1Z3 774 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 BCAP29Q9UHQ4 241 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 AGO1Q9UL18 857 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 RCE1Q9Y256 329 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 EXOGQ9Y2C4 368 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 PKP3Q9Y446 797 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 NEURL4Q96JN8 1562 aa4.07□□□□□ -1.76
BRCA1-220ENST00000492859 ATXN2Q99700 1313 aaKnown RBP4.07□□□□□ -1.76
BRCA1-220ENST00000492859 A0A0J9YVX5 310 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TCRBV5S4A2TA0A5A2 114 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CLEC18AA5D8T8 446 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ANKRD66B4E2M5 251 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 MCIDASD6RGH6 385 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 AURKAO14965 403 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PLRG1O43660 514 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms