RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
CACNA1C-228ENST00000492150 L3MBTL1Q9Y468 752 aa11.07□□□□□ -0.64
CACNA1C-228ENST00000492150 PCDHA3Q9Y5H8 950 aa11.07□□□□□ -0.64
CACNA1C-228ENST00000492150 OR2A25A4D2G3 310 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 NKX2-6A6NCS4 301 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 F8W8V4 182 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 H0YGG7 62 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 APOA4P06727 396 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 TPOP07202 933 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 HEXBP07686 556 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 UQCRHP07919 91 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 SLC26A3P40879 764 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 EMP3P54852 163 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 ARF3P61204 181 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 ABHD17BQ5VST6 288 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 AFTPHQ6ULP2 937 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 TMEM205Q6UW68 189 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 DOLPP1Q86YN1 238 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 KRT222Q8N1A0 295 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 AMER3Q8N944 861 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 OR52K1Q8NGK4 314 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 OR4L1Q8NH43 312 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 SUN3Q8TAQ9 357 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 RAD51AP1Q96B01 352 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 CABS1Q96KC9 395 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 ZNF778Q96MU6 729 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 ZFYVE21Q9BQ24 234 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 BDH2Q9BUT1 245 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 YIPF2Q9BWQ6 316 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 RAB11FIP5Q9BXF6 653 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 TGIF2Q9GZN2 237 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 C14orf105Q9NVL8 296 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 CDC14AQ9UNH5 594 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 NFS1Q9Y697 457 aa11.06□□□□□ -0.64
CACNA1C-228ENST00000492150 PSMD3O43242 534 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ARHGEF9O43307 516 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 FOXS1O43638 330 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 C1orf105O95561 183 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TSPAN12O95859 305 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TPM1P09493 284 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 MYBL2P10244 700 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 BDKRB1P46663 353 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 GDF10P55107 478 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ACVR1Q04771 509 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 FASTKQ14296 549 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 SYT16Q17RD7 645 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ZNF766Q5HY98 468 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TTC23LQ6PF05 361 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 NEK10Q6ZWH5 1172 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 LDB1Q86U70 411 aaPredicted RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ZC3H7AQ8IWR0 971 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ARHGEF39Q8N4T4 335 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ALG3Q92685 438 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TTC1Q99614 292 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 DPH7Q9BTV6 452 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TUBB6Q9BUF5 446 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TSSK1BQ9BXA7 367 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 MKKSQ9NPJ1 570 aaPredicted RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 RIMKLBQ9ULI2 386 aa11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 TTC7AQ9ULT0 858 aaPredicted RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 RUVBL2Q9Y230 463 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 RUVBL1Q9Y265 456 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 ANK3Q12955 4377 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-228ENST00000492150 PHF3Q92576 2039 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 ARID1AO14497 2285 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 A0A0U1RQJ8 604 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 FAM90A27PA6NNH2 459 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 CBFA2T2O43439 604 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 TJP3O95049 919 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 ERVK-10P10266 1014 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 ICAM2P13598 275 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 AP2B1P63010 937 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 HKDC1Q2TB90 917 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 OR6P1Q8NGX9 317 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 MVB12AQ96EY5 273 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 MMABQ96EY8 250 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 ACAT2Q9BWD1 397 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 HES7Q9BYE0 225 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 UCK2Q9BZX2 261 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 MARCH4Q9P2E8 410 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 MKL2Q9ULH7 1088 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 PCDHA13Q9Y5I0 950 aa11.04□□□□□ -0.64
CACNA1C-228ENST00000492150 SCN2AQ99250 2005 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 IGHV3-20A0A0C4DH32 117 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 IGKV1-8A0A0C4DH67 115 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 A8MUI8 341 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 FAM227AF5H4B4 570 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 PRRG2O14669 202 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 PRMT5O14744 637 aaPredicted RBP11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
CACNA1C-228ENST00000492150 SPRY1O43609 319 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms