RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LRRC8EQ6NSJ5 796 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 KIAA0408Q6ZU52 694 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PIWIL4Q7Z3Z4 852 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ZC3H7AQ8IWR0 971 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PARP9Q8IXQ6 854 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 KBTBD2Q8IY47 623 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 METTL27Q8N6F8 245 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PPFIBP2Q8ND30 876 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ABHD11Q8NFV4 315 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 OR4K1Q8NGD4 311 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 DNAJB14Q8TBM8 379 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FAR1Q8WVX9 515 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 THOC3Q96J01 351 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CABS1Q96KC9 395 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CCDC138Q96M89 665 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 SLX1AQ9BQ83 275 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FAM167BQ9BTA0 163 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 SGPP1Q9BX95 441 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FAM129AQ9BZQ8 928 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 RNF32Q9H0A6 362 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ILKAPQ9H0C8 392 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ZNF700Q9H0M5 742 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PCBD2Q9H0N5 130 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PARVBQ9HBI1 364 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FBXO6Q9NRD1 293 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 AGPAT4Q9NRZ5 378 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 C20orf96Q9NUD7 363 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 TRPC4Q9UBN4 977 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PDE10AQ9Y233 779 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 MRPS2Q9Y399 296 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CRYBG3Q68DQ2 2970 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 NBPF19A0A087WUL8 3843 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 H7BY64 318 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 HAT1O14929 419 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 TP73O15350 636 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 NSA2O95478 260 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CLDN1O95832 211 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 AHSGP02765 367 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 EIF2S1P05198 315 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 C8GP07360 202 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 ERVK-10P10266 1014 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 EDN3P14138 238 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 NPPBP16860 134 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 PGAM1P18669 254 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 GLRBP48167 497 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CDKN2DP55273 166 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 RPS15AP62244 130 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CSNK1G2P78368 415 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 MPP1Q00013 466 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 SP140Q13342 867 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 PTK6Q13882 451 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CRYMQ14894 314 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 PCOLCEQ15113 449 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 MSS51Q4VC12 460 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 C4orf17Q53FE4 359 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 TMEM214Q6NUQ4 689 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 UGT3A1Q6NUS8 523 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 H3F3CQ6NXT2 135 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 UBE2R2Q712K3 238 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 STRA8Q7Z7C7 330 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 IGDCC3Q8IVU1 814 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CPNE9Q8IYJ1 553 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 CATSPER1Q8NEC5 780 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 MCOLN3Q8TDD5 553 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 GRHL3Q8TE85 626 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 GRK7Q8WTQ7 553 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 EEF1AKMT1Q8WVE0 214 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 RERGQ96A58 199 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 C8orf44Q96CB5 159 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 PDLIM5Q96HC4 596 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 PRAP1Q96NZ9 151 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 WDR83Q9BRX9 315 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 NAT9Q9BTE0 207 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 DRC3Q9H069 523 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 EPS8L2Q9H6S3 715 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 ZNF160Q9HCG1 818 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 SNX12Q9UMY4 172 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 SLC5A6Q9Y289 635 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 SLC22A7Q9Y694 548 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 MAD1L1Q9Y6D9 718 aa7.94□□□□□ -1.14
SMARCB1-207ENST00000491967 GTF3C1Q12789 2109 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 A0A0A6YYC8 382 aaPredicted RBP7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 I3L1I5 382 aaPredicted RBP7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 DNALI1O14645 258 aaPredicted RBP7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 MAP2K7O14733 419 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 LCMT2O60294 686 aaKnown RBP7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 STSP08842 583 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 ICAM2P13598 275 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 CCND1P24385 295 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 TNFSF10P50591 281 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 TERF1P54274 439 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 TBPL1P62380 186 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 INAQ16352 499 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 NDUFA9Q16795 377 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 PHKG1Q16816 387 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 SPANXN3Q5MJ09 141 aa7.93□□□□□ -1.14
SMARCB1-207ENST00000491967 TEDDM1Q5T9Z0 273 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms