RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 ASPDHA6ND91 283 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 NPIPA5E9PKD4 350 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 I3L1I5 382 aaPredicted RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 TXNDC9O14530 226 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 CYC1P08574 325 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 TTPAP49638 278 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 EFNA3P52797 238 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 CSNK1G2P78368 415 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 TUBA3CQ13748 450 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 FASTKQ14296 549 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 MFSD4BQ5TF39 518 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 PLAG1Q6DJT9 500 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 FBXO42Q6P3S6 717 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 LRRC8BQ6P9F7 803 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 TUBA3EQ6PEY2 450 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 OTOAQ7RTW8 1153 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 LDB1Q86U70 411 aaPredicted RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 GHDCQ8N2G8 530 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 AMER2Q8N7J2 671 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 TMEM178AQ8NBL3 297 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 AGAP11Q8TF27 550 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 CA5BP1Q8WTZ4 195 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 MAIP1Q8WWC4 291 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 SCMH1Q96GD3 660 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 ZNF778Q96MU6 729 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 FRMD6Q96NE9 622 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 UTP23Q9BRU9 249 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 HES7Q9BYE0 225 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 UTP6Q9NYH9 597 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 NPIPA1Q9UND3 350 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 R3HDM2Q9Y2K5 976 aaKnown RBP13.68□□□□□ -0.22
SSR4-212ENST00000491833 FOXS1O43638 330 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 CEP104O60308 925 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 CCNDBP1O95273 360 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 TSPAN12O95859 305 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 PKMP14618 531 aaKnown RBP13.67□□□□□ -0.22
SSR4-212ENST00000491833 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
SSR4-212ENST00000491833 CD46P15529 392 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 ADRA1DP25100 572 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 RPA3P35244 121 aaPredicted RBP13.67□□□□□ -0.22
SSR4-212ENST00000491833 AVPR1BP47901 424 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 MAT1AQ00266 395 aaKnown RBP13.67□□□□□ -0.22
SSR4-212ENST00000491833 OR1C1Q15619 314 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 MEP1AQ16819 746 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 FCRLBQ6BAA4 426 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 LANCL3Q6ZV70 420 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
SSR4-212ENST00000491833 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 ACBD4Q8NC06 268 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 SMPDL3AQ92484 453 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 PEX13Q92968 403 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 TMEM121Q9BTD3 319 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 VN1R1Q9GZP7 353 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 NEU2Q9Y3R4 380 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 TCAF1Q9Y4C2 921 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 NF1P21359 2839 aa13.67□□□□□ -0.22
SSR4-212ENST00000491833 IGHV3-20A0A0C4DH32 117 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 CTAGE9A4FU28 777 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 E9PLN8 166 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 PRRG2O14669 202 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 ERGP11308 486 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 RPS3P23396 243 aaKnown RBP eCLIP13.66□□□□□ -0.224e-22■■■■□ 19.5
SSR4-212ENST00000491833 TSTA3Q13630 321 aaPredicted RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 FAM53BQ14153 422 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 H3F3CQ6NXT2 135 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 CRLF3Q8IUI8 442 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 ARHGEF39Q8N4T4 335 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 PPHLN1Q8NEY8 458 aaKnown RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 OR2A5Q96R48 311 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 TREX2Q9BQ50 279 aaPredicted RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 VKORC1Q9BQB6 163 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 P2RY12Q9H244 342 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 MARCH4Q9P2E8 410 aaPredicted RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 TSR3Q9UJK0 312 aaKnown RBP13.66□□□□□ -0.22
SSR4-212ENST00000491833 TACC2O95359 2948 aa13.66□□□□□ -0.22
SSR4-212ENST00000491833 IGKV1-8A0A0C4DH67 115 aa13.65□□□□□ -0.22
SSR4-212ENST00000491833 E7EVH7 732 aa13.65□□□□□ -0.22
SSR4-212ENST00000491833 P2RX6O15547 441 aa13.65□□□□□ -0.22
SSR4-212ENST00000491833 ASNA1O43681 348 aa13.65□□□□□ -0.22
SSR4-212ENST00000491833 SUN1O94901 812 aa13.65□□□□□ -0.22
SSR4-212ENST00000491833 ZNF24P17028 368 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms