RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PRTGQ2VWP7 1150 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FAM214AQ32MH5 1076 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TTLL10Q6ZVT0 673 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TMPRSS11BQ86T26 416 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CNPY4Q8N129 248 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CSNK1A1LQ8N752 337 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 THAP11Q96EK4 314 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RUFY1Q96T51 708 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GPR87Q9BY21 358 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PELI2Q9HAT8 420 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NDOR1Q9UHB4 597 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PTBP2Q9UKA9 531 aaKnown RBP15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KCNE2Q9Y6J6 123 aa15.55■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PKD1L2Q7Z442 2459 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 IQANK1A0A1B0GTG1 560 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 HYKKA2RU49 373 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 UBXN8O00124 270 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TXNDC9O14530 226 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ZZEF1O43149 2961 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SHBGP04278 402 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PTPN4P29074 926 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 BCL6P41182 706 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 HSPA7P48741 367 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ERCC6LQ2NKX8 1250 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NKAIN1Q4KMZ8 207 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FBXO48Q5FWF7 155 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CATSPEREQ5SY80 951 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TIFABQ6ZNK6 161 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PLD6Q8N2A8 252 aaKnown RBP15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 OR4K1Q8NGD4 311 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CABS1Q96KC9 395 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GPR78Q96P69 363 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C17orf62Q9BQA9 187 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NLNQ9BYT8 704 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FAM117AQ9C073 453 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ACTL8Q9H568 366 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 DNAJC11Q9NVH1 559 aa15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 IFT80Q9P2H3 777 aaPredicted RBP15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RUVBL1Q9Y265 456 aaKnown RBP15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 FARSAQ9Y285 508 aaKnown RBP15.54■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 KCNE1BA0A087WTH5 132 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TRBC2A0A5B9 178 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 P2RX6O15547 441 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 STK16O75716 305 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MED26O95402 600 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CAPN1P07384 714 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 COL6A2P12110 1019 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 EMP3P54852 163 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RPS18P62269 152 aaKnown RBP15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CYP4F2P78329 520 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 REEP5Q00765 189 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MEF2AQ02078 507 aaPredicted RBP15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CDC20Q12834 499 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CDC16Q13042 620 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NCF4Q15080 339 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TSNAXIP1Q2TAA8 658 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MUM1Q2TAK8 710 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 HKDC1Q2TB90 917 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TECRLQ5HYJ1 363 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 EMBQ6PCB8 327 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NXPE4Q6UWF7 544 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 VN1R4Q7Z5H5 301 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 TBC1D19Q8N5T2 526 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ENDOVQ8N8Q3 282 aaKnown RBP15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MFSD9Q8NBP5 474 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 AENQ8WTP8 325 aaKnown RBP15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 UBTD2Q8WUN7 234 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C10orf90Q96M02 699 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SARGQ9BW04 601 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CAPS2Q9BXY5 557 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PPCSQ9HAB8 311 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GPRC5BQ9NZH0 403 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GPN3Q9UHW5 284 aaPredicted RBP15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 HEATR5BQ9P2D3 2071 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LAMA5O15230 3695 aa15.53■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SPTBP11277 2137 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 NKX2-8O15522 239 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LCMT2O60294 686 aaKnown RBP15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CCNT2O60583 730 aaKnown RBP15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CREG1O75629 220 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RFPL1O75677 317 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RBP1P09455 135 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PRKAR1AP10644 381 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 PIM1P11309 404 aaPredicted RBP15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 MTHFD2P13995 350 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GNAZP19086 355 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ITGAXP20702 1163 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 HSD17B3P37058 310 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 RHDQ02161 417 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SLC9A5Q14940 896 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 CRTC2Q53ET0 693 aaPredicted RBP15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 GARNL3Q5VVW2 1013 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 C16orf46Q6P387 395 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 LRRC70Q7Z2Q7 622 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SYVN1Q86TM6 617 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 METTL27Q8N6F8 245 aaPredicted RBP15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SNX31Q8N9S9 440 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 ESAMQ96AP7 390 aa15.52■□□□□ 0.08
MSH5-SAPCD1-206ENST00000491552 SCYL1Q96KG9 808 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms