RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 CCT8L2Q96SF2 557 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 VTI1BQ9UEU0 232 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 SNX7Q9UNH6 387 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 SNX6Q9UNH7 406 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 PCDHGA11Q9Y5H2 935 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 KLK4Q9Y5K2 254 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 ZNF195O14628 629 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 ALOX15P16050 662 aaPredicted RBP20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 CDH3P22223 829 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 ACP1P24666 158 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 CXCR2P25025 360 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 HTR6P50406 440 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 NAA25Q14CX7 972 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 HIST2H2ACQ16777 129 aaPredicted RBP20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 FRG2Q64ET8 278 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 HIST2H2AA3Q6FI13 130 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 MED27Q6P2C8 311 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 WDR74Q6RFH5 385 aaPredicted RBP20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 PLXDC1Q8IUK5 500 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 KRT78Q8N1N4 520 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 FRG2BQ96QU4 278 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 MAP3K3Q99759 626 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 NUF2Q9BZD4 464 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 KLHL25Q9H0H3 589 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 SEMA6CQ9H3T2 930 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 TUBB1Q9H4B7 451 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 ELOVL6Q9H5J4 265 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 C1GALT1Q9NS00 363 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 ANKMY1Q9P2S6 941 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 DCTN4Q9UJW0 460 aa20.87■□□□□ 0.93
VCPKMT-204ENST00000491402 MN1Q10571 1320 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 A0A1W2PQM1 296 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 FEZF1A0PJY2 475 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 OR2A25A4D2G3 310 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 TLCD2A6NGC4 264 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 KRT6AP02538 564 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 KRT6BP04259 564 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 RPLP0P05388 317 aaKnown RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 SDHBP21912 280 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 GRK3P35626 688 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 KRT6CP48668 564 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 CCL7P80098 99 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 SF3A3Q12874 501 aaKnown RBP eCLIP20.86■□□□□ 0.931e-11■■■■□ 26.1
VCPKMT-204ENST00000491402 SQSTM1Q13501 440 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 CCDC157Q569K6 752 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 FIGLAQ6QHK4 219 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 TMIGD1Q6UXZ0 262 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 PAQR7Q86WK9 346 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 LAS2Q8IYD9 372 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 OR7G3Q8NG95 312 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 RFWD2Q8NHY2 731 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 WDR20Q8TBZ3 569 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 USP7Q93009 1102 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 ZUFSPQ96AP4 578 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 HBEGFQ99075 208 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 CD180Q99467 661 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 ELAC2Q9BQ52 826 aaKnown RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 NUDT22Q9BRQ3 303 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 RTKNQ9BST9 563 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 PITHD1Q9GZP4 211 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 FARSBQ9NSD9 589 aaKnown RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 PSD3Q9NYI0 1048 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 ZNF490Q9ULM2 529 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 BTRCQ9Y297 605 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 PTGDR2Q9Y5Y4 395 aa20.86■□□□□ 0.93
VCPKMT-204ENST00000491402 SPAARA0A1B0GVQ0 90 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 DCDC2BA2VCK2 349 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 MANBAO00462 879 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 HAT1O14929 419 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 PIP5K1BO14986 540 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 KIF1CO43896 1103 aaKnown RBP20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 ULK1O75385 1050 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 C9P02748 559 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 GP1BAP07359 652 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 ST6GAL1P15907 406 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 AQP5P55064 265 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 BTKQ06187 659 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 IFT88Q13099 833 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 ABRAXAS2Q15018 415 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 VWA5B1Q5TIE3 1220 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 FCRL6Q6DN72 434 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 ADNP2Q6IQ32 1131 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 HOMEZQ8IX15 550 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 UBE2E3Q969T4 207 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 REPS1Q96D71 796 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 C19orf60Q96EN9 201 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 PPP1R36Q96LQ0 422 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 SIKE1Q9BRV8 207 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 LRRN3Q9H3W5 708 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 TMEM9Q9P0T7 183 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 KLHL14Q9P2G3 628 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 TRBC2A0A5B9 178 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 CEACAM1P13688 526 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 HOXB3P14651 431 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 NOVA1P51513 510 aaKnown RBP20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 NEK2P51955 445 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 PLD3Q8IV08 490 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 DDIASQ8IXT1 998 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 SELENOMQ8WWX9 145 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 MTFMTQ96DP5 389 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms