RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TCP11X1B4DZS4 312 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 I3L1I5 382 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-219ENST00000491183 TXNDC9O14530 226 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 SEC31AO94979 1220 aaKnown RBP17.1■□□□□ 0.33
HMGN1-219ENST00000491183 HRH2P25021 359 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 EMP2P54851 167 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 CSNK1G2P78368 415 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 NAE1Q13564 534 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 SYT16Q17RD7 645 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 HECTD2Q5U5R9 776 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 IGFL2Q6UWQ7 119 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 SHISA5Q8N114 240 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 ZADH2Q8N4Q0 377 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 CISD2Q8N5K1 135 aaKnown RBP17.1■□□□□ 0.33
HMGN1-219ENST00000491183 LRRC39Q96DD0 335 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 OLFM1Q99784 485 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 YIPF2Q9BWQ6 316 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 DRC3Q9H069 523 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 VWA7Q9Y334 891 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
HMGN1-219ENST00000491183 KCNE1BA0A087WTH5 132 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 IDSB3KWA1 339 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 CCDC188H7C350 402 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 HPP00738 406 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ACPPP15309 386 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 NPPBP16860 134 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 FDXRP22570 491 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 EFNA3P52797 238 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 IL2P60568 153 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 MAT1AQ00266 395 aaKnown RBP17.09■□□□□ 0.33
HMGN1-219ENST00000491183 SP140Q13342 867 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 FAM53BQ14153 422 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 HIF1AQ16665 826 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 PALM2Q8IXS6 379 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 IQCKQ8N0W5 287 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 GPATCH11Q8N954 259 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 TM9SF4Q92544 642 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ALKBH8Q96BT7 664 aaKnown RBP17.09■□□□□ 0.33
HMGN1-219ENST00000491183 THOC3Q96J01 351 aaKnown RBP17.09■□□□□ 0.33
HMGN1-219ENST00000491183 MACROD1Q9BQ69 325 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 SGPP1Q9BX95 441 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 TRIM31Q9BZY9 425 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 TGIF2Q9GZN2 237 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 LHPPQ9H008 270 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 PCBD2Q9H0N5 130 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ZNF160Q9HCG1 818 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 MKKSQ9NPJ1 570 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ASF1BQ9NVP2 202 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 MAP10Q9P2G4 905 aa17.09■□□□□ 0.33
HMGN1-219ENST00000491183 ESPL1Q14674 2120 aa17.08■□□□□ 0.33
HMGN1-219ENST00000491183 FEZF1A0PJY2 475 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 MAP2K7O14733 419 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 PRPF4O43172 522 aaKnown RBP eCLIP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 LCMT2O60294 686 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 KLHL18O94889 574 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 VARSP26640 1264 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 ARL4CP56559 192 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 RPS15AP62244 130 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 MRPL49Q13405 166 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 PDAP1Q13442 181 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 FRG1Q14331 258 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 FASTKD3Q14CZ7 662 aaKnown RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 FAM45BPQ6NSW5 357 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 LCTLQ6UWM7 567 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 TMEM207Q6UWW9 146 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 PRSS41Q7RTY9 318 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 AMER2Q8N7J2 671 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 OR9A4Q8NGU2 314 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 FAM45AQ8TCE6 357 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 TM4SF19Q96DZ7 209 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 SNF8Q96H20 258 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 VPS50Q96JG6 964 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 AGAP4Q96P64 663 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 IKZF3Q9UKT9 509 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 CORO1CQ9ULV4 474 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-219ENST00000491183 NTNG1Q9Y2I2 539 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 PSAT1Q9Y617 370 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 SCN3AQ9NY46 2000 aa17.08■□□□□ 0.32
HMGN1-219ENST00000491183 A0A1W2PQ72 361 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 E7ESA3 106 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 ANXA5P08758 320 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 COX6A1P12074 109 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 BCL6P41182 706 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 MRPS25P82663 173 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PDIA2Q13087 525 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 NDUFA9Q16795 377 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 EIF2S3LQ2VIR3 472 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 FAAH2Q6GMR7 532 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 C17orf64Q86WR6 236 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 ZC3H7AQ8IWR0 971 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 OR56A3Q8NH54 315 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PSMF1Q92530 271 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms