RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 VSX2P58304 361 aaPredicted RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 GRB7Q14451 532 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 GBX1Q14549 363 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SLC9A5Q14940 896 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 TLR1Q15399 786 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 EIF2S3LQ2VIR3 472 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 GLE1Q53GS7 698 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 WASHC2DQ5SRD0 308 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 RBM20Q5T481 1227 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 GARNL3Q5VVW2 1013 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 ISLR2Q6UXK2 745 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CYHR1Q6ZMK1 362 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 KIAA0408Q6ZU52 694 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 NEK10Q6ZWH5 1172 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 RNF44Q7L0R7 432 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 MAMDC2Q7Z304 686 aaPredicted RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 STRA8Q7Z7C7 330 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CISD2Q8N5K1 135 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 LRRN4CLQ8ND94 238 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 ST6GALNAC3Q8NDV1 305 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SMPDL3AQ92484 453 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 KCNJ9Q92806 393 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 MIEF2Q96C03 454 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 IL17FQ96PD4 163 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SPSB2Q99619 263 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 BARD1Q99728 777 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 CRB3Q9BUF7 120 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SLC22A11Q9NSA0 550 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 ASF1BQ9NVP2 202 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 PSD3Q9NYI0 1048 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 ZFATQ9P243 1243 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 HS3ST3B1Q9Y662 390 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 COMMD10Q9Y6G5 202 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 SVILO95425 2214 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 DYTNA2CJ06 578 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 OR2A25A4D2G3 310 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 WIPF3A6NGB9 483 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 SOCS6O14544 535 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 CNOT3O75175 753 aaKnown RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 SEMA7AO75326 666 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 ERLIN1O75477 346 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 CYC1P08574 325 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 ERGP11308 486 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 ICAM2P13598 275 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 ENO3P13929 434 aaPredicted RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 ACPPP15309 386 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 HRH2P25021 359 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 RPA3P35244 121 aaPredicted RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 BDKRB1P46663 353 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 ABATP80404 500 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 NR6A1Q15406 480 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 INAQ16352 499 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 NDUFA9Q16795 377 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 HECTD2Q5U5R9 776 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 LRRC8EQ6NSJ5 796 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 RPUSD3Q6P087 351 aaKnown RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 PAQR3Q6TCH7 311 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 KIRREL2Q6UWL6 708 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 RIPOR1Q6ZS17 1223 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 GALNT7Q86SF2 657 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 TAX1BP1Q86VP1 789 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 GPATCH11Q8N954 259 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 OR2A1Q8NGT9 310 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 OR9A1PQ8NGU1 263 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 DNAJB14Q8TBM8 379 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 CD200R1Q8TD46 325 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 EEF1AKMT1Q8WVE0 214 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 RERGQ96A58 199 aaPredicted RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 MIPEPQ99797 713 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 MRPS30Q9NP92 439 aaKnown RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 ZNF446Q9NWS9 450 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 LUZP4Q9P127 313 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 VWA7Q9Y334 891 aa9.88□□□□□ -0.83
TTC28-207ENST00000490475 DIDO1Q9BTC0 2240 aaKnown RBP9.88□□□□□ -0.83
TTC28-207ENST00000490475 CREBBPQ92793 2442 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 IGLV3-12A0A075B6K2 115 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 TCRBV9S1A1TA0A576 114 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 MYO1CO00159 1063 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 EIF3FO00303 357 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 CTSVO60911 334 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 PSIP1O75475 530 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 ANXA5P08758 320 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 ZGLP1P0C6A0 271 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 EZRP15311 586 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 SAT1P21673 171 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 FBLP22087 321 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 SKIV2L2P42285 1042 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 MFAP5Q13361 173 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 DSG2Q14126 1118 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 ZNF169Q14929 603 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 PRR30Q53SZ7 412 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 CRB2Q5IJ48 1285 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms