RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CPSF2Q9P2I0 782 aaKnown RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 SRPK3Q9UPE1 567 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 PLLPQ9Y342 182 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 PCDHGA4Q9Y5G9 962 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 FREM2Q5SZK8 3169 aa16.69■□□□□ 0.26
ERCC3-207ENST00000490062 TPRP12270 2363 aaKnown RBP16.69■□□□□ 0.26
ERCC3-207ENST00000490062 CHD8Q9HCK8 2581 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 A0A0J9YVX5 310 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 AGRPO00253 132 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ZSCAN9O15535 394 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 TYROBPO43914 113 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 DLX3O60479 287 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 CCNT2O60583 730 aaKnown RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 UGDHO60701 494 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 PRAMEF4O60810 478 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 CPNE3O75131 537 aaKnown RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 KATNA1O75449 491 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 SCRG1O75711 98 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 OR2B3O76000 313 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ONECUT2O95948 504 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 EPB42P16452 691 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 CXCR2P25025 360 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 RORAP35398 523 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 AHRP35869 848 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 SCTRP47872 440 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 PRKAA2P54646 552 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 NAA20P61599 178 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 GRM7Q14831 915 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 DEFB110Q30KQ9 67 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 PRAMEF9Q5VWM5 478 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 FRMPD2BQ6IN97 320 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 RHBDD2Q6NTF9 364 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 C16orf46Q6P387 395 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 PROSER1Q86XN7 944 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 SRRM1Q8IYB3 904 aaKnown RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ARHGEF39Q8N4T4 335 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 MFSD9Q8NBP5 474 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ZNF248Q8NDW4 579 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 N4BP2L2Q92802 583 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 TM4SF19Q96DZ7 209 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 PTCD3Q96EY7 689 aaKnown RBP16.68■□□□□ 0.26
ERCC3-207ENST00000490062 SMC6Q96SB8 1091 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 AIF1LQ9BQI0 150 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 EFCAB11Q9BUY7 163 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 SYNPO2LQ9H987 977 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ABCF3Q9NUQ8 709 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 MID2Q9UJV3 735 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 ACACBO00763 2458 aa16.68■□□□□ 0.26
ERCC3-207ENST00000490062 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 LOC102723532A0A0G2JNH3 316 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 G3V2L1 256 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 H0YGG7 62 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 CLGNO14967 610 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ZNF28P17035 718 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ARSFP54793 590 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ARF3P61204 181 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 HERVK_113P63132 956 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 LAPTM5Q13571 262 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 FBXO48Q5FWF7 155 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 GARNL3Q5VVW2 1013 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ZNF385CQ66K41 422 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ZYG11AQ6WRX3 759 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 VN1R4Q7Z5H5 301 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ADCK2Q7Z695 626 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 TMPRSS11BQ86T26 416 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 TMEM126BQ8IUX1 230 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 TBC1D19Q8N5T2 526 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 PROKR1Q8TCW9 393 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 L3HYPDHQ96EM0 354 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 DPH2Q9BQC3 489 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ERVK-6Q9BXR3 956 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 DPH1Q9BZG8 443 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ULBP3Q9BZM4 244 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 STMN4Q9H169 189 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 GEMIN8Q9NWZ8 242 aaKnown RBP16.67■□□□□ 0.26
ERCC3-207ENST00000490062 PCTPQ9UKL6 214 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 TSC22D4Q9Y3Q8 395 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 IGF2RP11717 2491 aa16.67■□□□□ 0.26
ERCC3-207ENST00000490062 ASPMQ8IZT6 3477 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 ZNF749O43361 778 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 LCMT2O60294 686 aaKnown RBP16.66■□□□□ 0.26
ERCC3-207ENST00000490062 KIAA0754O94854 1291 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 SIX3O95343 332 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-207ENST00000490062 CTSBP07858 339 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 MYZAPP0CAP1 466 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 IMPDH1P20839 514 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 EEF1DP29692 281 aaKnown RBP16.66■□□□□ 0.26
ERCC3-207ENST00000490062 BCL6P41182 706 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 DNAJB13P59910 316 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 ABHD18Q0P651 414 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 PWP1Q13610 501 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 GTF2H2Q13888 395 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 FAM214AQ32MH5 1076 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 WASHC2DQ5SRD0 308 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 GTF2H2CQ6P1K8 395 aa16.66■□□□□ 0.26
ERCC3-207ENST00000490062 TIPARPQ7Z3E1 657 aaKnown RBP16.66■□□□□ 0.26
ERCC3-207ENST00000490062 NLGN4XQ8N0W4 816 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms