RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ACTA2P62736 377 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ACTG2P63267 376 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RHEBQ15382 184 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF517Q6ZMY9 492 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SIDT2Q8NBJ9 832 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DCSTAMPQ9H295 470 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 FBRSQ9HAH7 460 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PRODH2Q9UF12 536 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DDX60Q8IY21 1712 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PRSS51A0A1B0GVH4 220 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 MT-CYBP00156 380 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PRKCHP24723 683 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 EIF2S3P41091 472 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SEPHS1P49903 392 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF280AP59817 542 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 GALNT2Q10471 571 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PTGR1Q14914 329 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CNKSR3Q6P9H4 555 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 HDDC3Q8N4P3 179 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 KREMEN2Q8NCW0 462 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OR2AP1Q8NGE2 309 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OR52J3Q8NH60 311 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 LRRC20Q8TCA0 184 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 GNPDA2Q8TDQ7 276 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZC3H10Q96K80 434 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZCCHC3Q9NUD5 404 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ERVK-11Q9UQG0 969 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CPQQ9Y646 472 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 LSM1O15116 133 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 MRPL49Q13405 166 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 GAS6Q14393 721 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CLCA4Q14CN2 919 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 REEP3Q6NUK4 255 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 IQCF2Q8IXL9 164 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OR6K6Q8NGW6 343 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 HDAC2Q92769 488 aaKnown RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 FAM129BQ96TA1 746 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 C17orf62Q9BQA9 187 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 AKTIPQ9H8T0 292 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZFP57Q9NU63 452 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RIMKLBQ9ULI2 386 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CDK5RAP2Q96SN8 1893 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 AOC2O75106 756 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 APBB3O95704 486 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DPP6P42658 865 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 MAGEA2P43356 314 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RING1Q06587 406 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ALG10Q5BKT4 473 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SLC9B2Q86UD5 537 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 LGI4Q8N135 537 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SPATA22Q8NHS9 363 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PIGKQ92643 395 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ADAMTS10Q9H324 1103 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 HCN4Q9Y3Q4 1203 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 UPK3BL1B0FP48 263 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 UPK3BL2E5RIL1 263 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 USP2O75604 605 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 NUMBP49757 651 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 TRAM2Q15035 370 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZMIZ2Q8NF64 920 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 TSGA13Q96PP4 275 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ATG10Q9H0Y0 220 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RAB9BQ9NP90 201 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 MEPEQ9NQ76 525 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RGPD5Q99666 1765 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 E2F3O00716 465 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DLGAP1O14490 977 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OXSR1O95747 527 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ADH5P11766 374 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ARFRP1Q13795 201 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 NFE2L1Q14494 772 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 DSC3Q14574 896 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PLA2G4EQ3MJ16 856 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ZSWIM9Q86XI8 627 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CACUL1Q86Y37 369 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SLC15A3Q8IY34 581 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OR6K2Q8NGY2 324 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 RANBP9Q96S59 729 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OSBPL7Q9BZF2 842 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 OR51V1Q9H2C8 321 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 EBF2Q9HAK2 575 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ROBO1Q9Y6N7 1651 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 A0A1W2PRQ8 180 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 GNB5O14775 395 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 PHYHO14832 338 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 ACTR1AP61163 376 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 NRG1Q02297 640 aaPredicted RBP8.61□□□□□ -1.03
LSAMP-205ENST00000490035 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
LSAMP-205ENST00000490035 CLEC20AQ6ZU45 233 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms