RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 OR56A3Q8NH54 315 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 N4BP2L2Q92802 583 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 FOPNLQ96NB1 174 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 MACROD1Q9BQ69 325 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 SLC7A5P2Q9GIP4 190 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 ZNF304Q9HCX3 659 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 NXT1Q9UKK6 140 aaKnown RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 KCNE1BA0A087WTH5 132 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 IGHV1-45A0A0A0MS14 117 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 WIPF3A6NGB9 483 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 IDSB3KWA1 339 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MAP3K7O43318 606 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 LCMT2O60294 686 aaKnown RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 PIAS1O75925 651 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 TBX6O95947 436 aaPredicted RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 ITGA8P53708 1063 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MRPS25P82663 173 aaKnown RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MAT1AQ00266 395 aaKnown RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 HYAL2Q12891 473 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 THOC5Q13769 683 aaKnown RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 HIF1AQ16665 826 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MUM1Q2TAK8 710 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 AFAP1L2Q8N4X5 818 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 ZNF740Q8NDX6 193 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 OR4K1Q8NGD4 311 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 PPP4R1Q8TF05 950 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 ANKRD49Q8WVL7 239 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MOCOSQ96EN8 888 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 LINGO1Q96FE5 620 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 FER1L6-AS2Q96M78 137 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 NPAS2Q99743 824 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 CRB3Q9BUF7 120 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 SEMA3GQ9NS98 782 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 ASF1BQ9NVP2 202 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 MOCS1Q9NZB8 636 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 GPN3Q9UHW5 284 aaPredicted RBP11.21□□□□□ -0.61
SRSF4-204ENST00000489898 CDC23Q9UJX2 597 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 B3GNT3Q9Y2A9 372 aa11.21□□□□□ -0.61
SRSF4-204ENST00000489898 NCKAP5O14513 1909 aa11.21□□□□□ -0.62
SRSF4-204ENST00000489898 CACNA1CQ13936 2221 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 A0A0A6YYC8 382 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 GOLGA6L10A0A0M3HER8 536 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 H7BY64 318 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 I3L1I5 382 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ZSCAN12O43309 604 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 DNAJB6O75190 326 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 VPS26AO75436 327 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CBX6O95503 412 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 TTC4O95801 387 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 HPP00738 406 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 NPPBP16860 134 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 HSD17B2P37059 387 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ABATP80404 500 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 DR1Q01658 176 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 FAM53BQ14153 422 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 NAA25Q14CX7 972 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 FAM214AQ32MH5 1076 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 BBS9Q3SYG4 887 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 UBAP2Q5T6F2 1119 aaKnown RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 HECTD2Q5U5R9 776 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 GARNL3Q5VVW2 1013 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF324BQ6AW86 544 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 UGT3A1Q6NUS8 523 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 TTC23LQ6PF05 361 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 LCTLQ6UWM7 567 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 LANCL3Q6ZV70 420 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ZC3HC1Q86WB0 502 aaKnown RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CEP97Q8IW35 865 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 PRSS58Q8IYP2 241 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 C17orf53Q8N3J3 647 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CLEC1AQ8NC01 280 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 KCT2Q8NC54 265 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ABHD11Q8NFV4 315 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 OR9A4Q8NGU2 314 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CALML6Q8TD86 181 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 PRAP1Q96NZ9 151 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CCDC177Q9NQR7 707 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 LANCL2Q9NS86 450 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF282Q9UDV7 671 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 TRMT6Q9UJA5 497 aaKnown RBP11.2□□□□□ -0.62
SRSF4-204ENST00000489898 C3orf18Q9UK00 162 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 CLDN16Q9Y5I7 305 aa11.2□□□□□ -0.62
SRSF4-204ENST00000489898 HRNRQ86YZ3 2850 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms