RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SCARB2Q14108 478 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 EFTUD2Q15029 972 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS26A-206ENST00000489794 FGD3Q5JSP0 725 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 HECTD3Q5T447 861 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 BHLHB9Q6PI77 547 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 PRSS55Q6UWB4 352 aaPredicted RBP4.92□□□□□ -1.62
VPS26A-206ENST00000489794 GPR141Q7Z602 305 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 PRSS35Q8N3Z0 413 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 DCLK2Q8N568 766 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 KLHDC1Q8N7A1 406 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 OR5T2Q8NGG2 359 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 OR6S1Q8NH40 331 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 CTCFLQ8NI51 663 aaPredicted RBP4.92□□□□□ -1.62
VPS26A-206ENST00000489794 GDAP1L1Q96MZ0 367 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 CCDC3Q9BQI4 270 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 SYT15Q9BQS2 421 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 SH3GLB2Q9NR46 395 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
VPS26A-206ENST00000489794 KLHL8Q9P2G9 620 aaPredicted RBP4.92□□□□□ -1.62
VPS26A-206ENST00000489794 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
VPS26A-206ENST00000489794 A0A087WUV0 522 aaPredicted RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 A0A087X002 238 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 C15orf61A6NNL5 157 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 FLRT2O43155 660 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 FCGR3BO75015 233 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 YES1P07947 543 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 RPL35AP18077 110 aaKnown RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 GMPSP49915 693 aaPredicted RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 HUNKP57058 714 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 CYCSP99999 105 aaKnown RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 ROR1Q01973 937 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 IL10RBQ08334 325 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 TMEM187Q14656 261 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 PTPN14Q15678 1187 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 SUSD4Q5VX71 490 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 GPC2Q8N158 579 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 ZNF614Q8N883 585 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 NCOA7Q8NI08 942 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 DNASE1L2Q92874 299 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 AZIN2Q96A70 460 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 USP28Q96RU2 1077 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 TDRD1Q9BXT4 1180 aaKnown RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 LMAN1LQ9HAT1 526 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 CACNG5Q9UF02 275 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 SLC12A6Q9UHW9 1150 aa4.91□□□□□ -1.62
VPS26A-206ENST00000489794 EXOGQ9Y2C4 368 aaKnown RBP4.91□□□□□ -1.62
VPS26A-206ENST00000489794 SLC30A4O14863 429 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 MOCS2O96007 188 aaPredicted RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 ELAVL4P26378 380 aaKnown RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 TIA1P31483 386 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 KRT2P35908 639 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 NKX2-1P43699 371 aaPredicted RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 TSFMP43897 325 aaKnown RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 SLC6A12P48065 614 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 SRSF9Q13242 221 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 ZC2HC1BQ5TFG8 222 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 BSPRYQ5W0U4 402 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 ANKRD33Q7Z3H0 272 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 GLRX5Q86SX6 157 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 OR8H3Q8N146 312 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 SIX6OS1Q8N1H7 587 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 SMAP2Q8WU79 429 aaPredicted RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 KLHL5Q96PQ7 755 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 TRIM51Q9BSJ1 452 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 MLPHQ9BV36 600 aaPredicted RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 RIMS4Q9H426 269 aaPredicted RBP4.9□□□□□ -1.63
VPS26A-206ENST00000489794 EXOC1Q9NV70 894 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 VPS18Q9P253 973 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 TMEM181Q9P2C4 612 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 RASAL2Q9UJF2 1139 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.63
VPS26A-206ENST00000489794 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 FAM86B1E9PN63 330 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 NPIPA3F8WFD2 350 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PPIP5K2O43314 1243 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 STX6O43752 255 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PRAF2O60831 178 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 ZFAND5O76080 213 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 BAG3O95817 575 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 FAM86B2P0C5J1 330 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 TRIM49P0CI25 452 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 TRIM49CP0CI26 452 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PRKCIP41743 596 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 VEGFCP49767 419 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 RGS19P49795 217 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 LBX1P52954 281 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PTK6Q13882 451 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 TAB1Q15750 504 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 EXT1Q16394 746 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 TAZQ16635 292 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 TTC27Q6P3X3 843 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 FAM47EQ6ZV65 393 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 SLC24A5Q71RS6 500 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 BTN2A1Q7KYR7 527 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PTAR1Q7Z6K3 402 aaPredicted RBP4.89□□□□□ -1.63
VPS26A-206ENST00000489794 ANKRD23Q86SG2 305 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 PRUNE1Q86TP1 453 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 GBP7Q8N8V2 638 aaPredicted RBP4.89□□□□□ -1.63
VPS26A-206ENST00000489794 OR4D10Q8NGI6 311 aa4.89□□□□□ -1.63
VPS26A-206ENST00000489794 OR4C15Q8NGM1 316 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms