RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 OARD1Q9Y530 152 aa10.15□□□□□ -0.78
SCAMP4-208ENST00000489554 HEMK1Q9Y5R4 338 aaPredicted RBP10.15□□□□□ -0.78
SCAMP4-208ENST00000489554 MRPS18BQ9Y676 258 aaKnown RBP10.15□□□□□ -0.78
SCAMP4-208ENST00000489554 COL6A6A6NMZ7 2263 aa10.15□□□□□ -0.78
SCAMP4-208ENST00000489554 KALRNO60229 2985 aa10.15□□□□□ -0.78
SCAMP4-208ENST00000489554 A8MT66 165 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ISM1B1AKI9 464 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 E7EQ34 232 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 UBXN8O00124 270 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 MEN1O00255 615 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 SLC16A5O15375 505 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 DLX3O60479 287 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 C8GP07360 202 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 HBQ1P09105 142 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 RBP1P09455 135 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 PVRP15151 417 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 CHN1P15882 459 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 PTPN4P29074 926 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 GUCY1A3Q02108 690 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ERV3-1Q14264 604 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 TGFBIQ15582 683 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 CCDC153Q494R4 210 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ZYG11AQ6WRX3 759 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ATG14Q6ZNE5 492 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 UBE2R2Q712K3 238 aaPredicted RBP10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ADAMTSL2Q86TH1 951 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 SYVN1Q86TM6 617 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 GPR135Q8IZ08 494 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 RAB42Q8N4Z0 105 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 PDPRQ8NCN5 879 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 OR1L3Q8NH93 324 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 CFAP61Q8NHU2 1237 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 FLVCR1-AS1Q8TAF5 88 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 N4BP2L2Q92802 583 aaPredicted RBP10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 MR1Q95460 341 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 CLIP3Q96DZ5 547 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 CHMP6Q96FZ7 201 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 FOPNLQ96NB1 174 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 DPH2Q9BQC3 489 aaPredicted RBP10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 MECRQ9BV79 373 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 SLC7A5P2Q9GIP4 190 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 KLHL25Q9H0H3 589 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ACTL8Q9H568 366 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ACTR5Q9H9F9 607 aaPredicted RBP10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 SPHK1Q9NYA1 384 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 COPG2Q9UBF2 871 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 PLAGL1Q9UM63 463 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ASB1Q9Y576 335 aa10.14□□□□□ -0.79
SCAMP4-208ENST00000489554 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 BAHCC1Q9P281 2608 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 CDC14CA4D256 554 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 LRRC14BA6NHZ5 514 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 J3QKU1 62 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 MYO1CO00159 1063 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 TAPBPO15533 448 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 FKBP9O95302 570 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 BPGMP07738 259 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 ENO2P09104 434 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 ERGP11308 486 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 ALDH3A1P30838 453 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 RORAP35398 523 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 SERPINB4P48594 390 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 CDKL1Q00532 357 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 NFKB2Q00653 900 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 UGT8Q16880 541 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 C18orf21Q32NC0 220 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 ATP1A1-AS1Q5TC04 95 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 GKAP1Q5VSY0 366 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 KLC3Q6P597 504 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 GPSM1Q86YR5 675 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 LRRC56Q8IYG6 542 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 DSELQ8IZU8 1212 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 SLC38A9Q8NBW4 561 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 OR2L8Q8NGY9 312 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 C9orf43Q8TAL5 461 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 STAG3L4Q8TBR4 150 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 RDH11Q8TC12 318 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 MAGEC3Q8TD91 643 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 MGARPQ8TDB4 240 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 SKA2Q8WVK7 121 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 THAP4Q8WY91 577 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 RAD51AP1Q96B01 352 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 SCYL1Q96KG9 808 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 CCT8L2Q96SF2 557 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 TMEM79Q9BSE2 394 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 CHST8Q9H2A9 424 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 AKIRIN1Q9H9L7 192 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 PARVBQ9HBI1 364 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 FAM60AQ9NP50 221 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 INTS7Q9NVH2 962 aaKnown RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 CIDEBQ9UHD4 219 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 RNF112Q9ULX5 631 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 FARSAQ9Y285 508 aaKnown RBP10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 KCNMB2Q9Y691 235 aa10.13□□□□□ -0.79
SCAMP4-208ENST00000489554 AP1M2Q9Y6Q5 423 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms