RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 IL10RBQ08334 325 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 LGALS3BPQ08380 585 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 TRA2AQ13595 282 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-213ENST00000489241 ACCSLQ4AC99 568 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SIRPB2Q5JXA9 342 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 DCAF10Q5QP82 559 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 PM20D1Q6GTS8 502 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 CATSPER4Q7RTX7 472 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ASPGQ86U10 573 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 RTN4RL2Q86UN3 420 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ZNF410Q86VK4 478 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ERC1Q8IUD2 1116 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 CDK20Q8IZL9 346 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 EID3Q8N140 333 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 MAPKAPK5-AS1Q8N8E1 139 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 NOA1Q8NC60 698 aaKnown RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 OR2T12Q8NG77 320 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 URGCPQ8TCY9 931 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SLC26A7Q8TE54 656 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SAP25Q8TEE9 199 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ZNF473Q8WTR7 871 aaKnown RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 WBP2Q969T9 261 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 RUFY1Q96T51 708 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 MAP3K3Q99759 626 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 C17orf62Q9BQA9 187 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 LRRC1Q9BTT6 524 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 LAT2Q9GZY6 243 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ABCG8Q9H221 673 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SDR39U1Q9NRG7 319 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 STUB1Q9UNE7 303 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 A0A087X0K7 114 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 C16orf97H3BN30 126 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 BUB3O43684 328 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 XPNPEP2O43895 674 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 LETM1O95202 739 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 ATP1A1P05023 1023 aaKnown RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 ALPPP05187 535 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 PTMAP06454 111 aaKnown RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 ABHD2P08910 425 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 ALPPL2P10696 532 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 CETPP11597 493 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 AMD1P17707 334 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 IL10P22301 178 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 EPHA2P29317 976 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 DUTP33316 252 aaKnown RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 CDKN1AP38936 164 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 SMSP52788 366 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 GAGE5Q13069 117 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 GAGE6Q13070 117 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 PDK1Q15118 436 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 MAPK11Q15759 364 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 ZNF672Q499Z4 452 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 XKR3Q5GH77 459 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 ZNF852Q6ZMS4 543 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 KCTD8Q6ZWB6 473 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 ANO5Q75V66 913 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 GPR141Q7Z602 305 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 HDDC3Q8N4P3 179 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 RFLNBQ8N5W9 214 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 CCDC63Q8NA47 563 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 PHLDA1Q8WV24 401 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 SLC13A3Q8WWT9 602 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 TSACCQ96A04 125 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 FAM46BQ96A09 425 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 SLC47A1Q96FL8 570 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 EEF2KMTQ96G04 330 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 TSSK2Q96PF2 358 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 URM1Q9BTM9 101 aaKnown RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 C1orf21Q9H246 121 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 UBQLN3Q9H347 655 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 RIMS4Q9H426 269 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 CUEDC2Q9H467 287 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 GPR173Q9NS66 373 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 TRMT6Q9UJA5 497 aaKnown RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 KCNK6Q9Y257 313 aa3.93□□□□□ -1.78
XRN1-213ENST00000489241 MTF2Q9Y483 593 aaPredicted RBP3.93□□□□□ -1.78
XRN1-213ENST00000489241 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 RNF103-CHMP3A0A140T963 221 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 LOC101059948A0A1B0GTJ6 334 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 A0A1W2PN81 502 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 FAM149AA5PLN7 773 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 ANKDD1BA6NHY2 528 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 C2orf81A6NN90 581 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 NPIPA3F8WFD2 350 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 RNF103O00237 685 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 ACSL4O60488 711 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 PRKRAO75569 313 aaKnown RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 REC8O95072 547 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 PIGNO95427 931 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 APOHP02749 345 aaPredicted RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 F3P13726 295 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 NR1D1P20393 614 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 CDH3P22223 829 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 AHCYP23526 432 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 ALDH1B1P30837 517 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 CHRNA7P36544 502 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 RABIFP47224 123 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 GLIPR1P48060 266 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 HOXA1P49639 335 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms