RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FDCSPQ8NFU4 85 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ZCCHC10Q8TBK6 192 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 C16orf45Q96MC5 204 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF285Q96NJ3 590 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ILKAPQ9H0C8 392 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 SLC26A1Q9H2B4 701 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 RHOJQ9H4E5 214 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 MKKSQ9NPJ1 570 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 C14orf105Q9NVL8 296 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ADAMTS6Q9UKP5 1117 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 VPS4AQ9UN37 437 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 RUVBL1Q9Y265 456 aaKnown RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 A0A0A6YYC8 382 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 NPEPPSL1A6NEC2 478 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 E7ESA3 106 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 I3L1I5 382 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 OR1F1O43749 312 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 NRP2O60462 931 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 ZIC2O95409 532 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 STATHP02808 62 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 UMODP07911 640 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 GSTA2P09210 222 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 ZGLP1P0C6A0 271 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 GABRB3P28472 473 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 SPRP35270 261 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 EMP2P54851 167 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 POU4F1Q01851 419 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 RELAQ04206 551 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 KLC1Q07866 573 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 RGS1Q08116 209 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 USP10Q14694 798 aaKnown RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 SLMAPQ14BN4 828 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 PHKG1Q16816 387 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 MINDY4Q4G0A6 757 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 AGAP7PQ5VUJ5 663 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF425Q6IV72 752 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 LCTLQ6UWM7 567 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 C3orf62Q6ZUJ4 267 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 PPP1R32Q7Z5V6 425 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 ASPGQ86U10 573 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 ZC3HC1Q86WB0 502 aaKnown RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 STT3BQ8TCJ2 826 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 SLC13A3Q8WWT9 602 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 PYCR2Q96C36 320 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 AGAP4Q96P64 663 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 OLFM1Q99784 485 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 CPNE1Q99829 537 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 SLC29A3Q9BZD2 475 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 EPS8L2Q9H6S3 715 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 CNOT10Q9H9A5 744 aaKnown RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 C5AR2Q9P296 337 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 C19orf25Q9UFG5 118 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 MTRF1LQ9UGC7 380 aaKnown RBP8.69□□□□□ -1.02
HDAC6-232ENST00000489053 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 KCNE2Q9Y6J6 123 aa8.69□□□□□ -1.02
HDAC6-232ENST00000489053 NBASA2RRP1 2371 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NSG1A0A0A6YYJ2 146 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 IGKV1-8A0A0C4DH67 115 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 FEZF1A0PJY2 475 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 URADA6NGE7 173 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NCF1BA6NI72 391 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NCF1CA8MVU1 366 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 KIF2AO00139 706 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 PCDH17O14917 1159 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NDUFS4O43181 175 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 H2AFYO75367 372 aaKnown RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 WFS1O76024 890 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NCF1P14598 390 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 STMN1P16949 149 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF37AP17032 561 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 SSTR1P30872 391 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 PHBP35232 272 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 GP5P40197 560 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 HNMTP50135 292 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 MLLT10P55197 1068 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 FOXL2P58012 376 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 YBX1P67809 324 aaKnown RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 EEF1A2Q05639 463 aaKnown RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 FAM53BQ14153 422 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 HERC3Q15034 1050 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 RBBP5Q15291 538 aaKnown RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 WHAMMP3Q1A5X7 153 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 PRTGQ2VWP7 1150 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 FAAH2Q6GMR7 532 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NIPAL1Q6NVV3 410 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 IQCKQ8N0W5 287 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 CPT1CQ8TCG5 803 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 SLC5A11Q8WWX8 675 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 FBXL8Q96CD0 374 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 THOC3Q96J01 351 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms