RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SLC16A5O15375 505 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 FOXS1O43638 330 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 SERPINA7P05543 415 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 HEXBP07686 556 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 COX6A1P12074 109 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 CCND1P24385 295 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 RPS15AP62244 130 aaKnown RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 ELOAQ14241 798 aaKnown RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 SPANXN3Q5MJ09 141 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 RIPOR1Q6ZS17 1223 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 PRSS58Q8IYP2 241 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 ST6GALNAC3Q8NDV1 305 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 PARVBQ9HBI1 364 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 IARS2Q9NSE4 1012 aaKnown RBP12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 RIC8BQ9NVN3 520 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 SLC5A6Q9Y289 635 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 CSAG2Q9Y5P2 127 aa12.41□□□□□ -0.42
ATPAF2-207ENST00000488753 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 CCDC88CQ9P219 2028 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 IGHV1-45A0A0A0MS14 117 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 A0A0A6YYC8 382 aaPredicted RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 H7BY64 318 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 I3L1I5 382 aaPredicted RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 DNALI1O14645 258 aaPredicted RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 BMP10O95393 424 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 NSA2O95478 260 aaKnown RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 PRR35P0CG20 571 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 ICAM2P13598 275 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 AVPR1BP47901 424 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 TBPL1P62380 186 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 C4orf17Q53FE4 359 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 TMEM205Q6UW68 189 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 SYDE1Q6ZW31 735 aaPredicted RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 PSMF1Q92530 271 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 PRAP1Q96NZ9 151 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 MESP1Q9BRJ9 268 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 YIPF2Q9BWQ6 316 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 CORO1CQ9ULV4 474 aaPredicted RBP12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 PDE10AQ9Y233 779 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 NTNG1Q9Y2I2 539 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 NBPF19A0A087WUL8 3843 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 NUP210LQ5VU65 1888 aa12.4□□□□□ -0.42
ATPAF2-207ENST00000488753 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 POLEQ07864 2286 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 DYTNA2CJ06 578 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 P2RX6O15547 441 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 KLHL18O94889 574 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 LDLRP01130 860 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 HIST1H2AGP0C0S8 130 aaPredicted RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 RNF224P0DH78 156 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 HIST1H2ADP20671 130 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 GABRB3P28472 473 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 SOX11P35716 441 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 DHX9Q08211 1270 aaKnown RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 CDC16Q13042 620 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 INAQ16352 499 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 PAQR3Q6TCH7 311 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 LINC00696Q6ZRV3 163 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 VN1R4Q7Z5H5 301 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 ZC3H7AQ8IWR0 971 aaKnown RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 CAMKVQ8NCB2 501 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 GRHL3Q8TE85 626 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 EEF1AKMT1Q8WVE0 214 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 FAR1Q8WVX9 515 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 HIST1H2AHQ96KK5 128 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 CNDP1Q96KN2 507 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 C5orf34Q96MH7 638 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 NDNQ99608 321 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 HIST1H2AJQ99878 128 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 H2AFJQ9BTM1 129 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 ZNF700Q9H0M5 742 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 DDX47Q9H0S4 455 aaKnown RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 ERRFI1Q9UJM3 462 aaPredicted RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 ADAMTS6Q9UKP5 1117 aa12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 MRPS2Q9Y399 296 aaKnown RBP12.39□□□□□ -0.43
ATPAF2-207ENST00000488753 FFAR3O14843 346 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 GPR42O15529 346 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 AHSGP02765 367 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 EDN3P14138 238 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 IVDP26440 423 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 GRK3P35626 688 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 CDKN2DP55273 166 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 AP1S2P56377 157 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 IL2P60568 153 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 CSNK1G2P78368 415 aa12.38□□□□□ -0.43
ATPAF2-207ENST00000488753 ARG2P78540 354 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms