RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 H0Y626 953 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 H0YAE9 185 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 FLRT2O43155 660 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 RLN1P04808 185 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 ATP1B1P05026 303 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 HSP90AB1P08238 724 aaKnown RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 GP1BBP13224 206 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 EPORP19235 508 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 CASTP20810 708 aaKnown RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 MUTP22033 750 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 TIA1P31483 386 aaKnown RBP eCLIP2.85□□□□□ -1.959e-9■■■□□ 17.1
CD46-215ENST00000488596 SFTPDP35247 375 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 DNA2P51530 1060 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 NR0B1P51843 470 aaKnown RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 SULT2A1Q06520 285 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 TMEM187Q14656 261 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 OPCMLQ14982 345 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 RBBP7Q16576 425 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 TXNRD3NBQ6F5E7 133 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 OR4C11Q6IEV9 310 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 PWWP2BQ6NUJ5 590 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 TTC27Q6P3X3 843 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 SLC25A47Q6Q0C1 308 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 MSANTD1Q6ZTZ1 278 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 C5orf24Q7Z6I8 188 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 MYPOPQ86VE0 399 aaPredicted RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 HOGA1Q86XE5 327 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 MARVELD2Q8N4S9 558 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 NIPA2Q8N8Q9 360 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 WDSUB1Q8N9V3 476 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 GPRC5AQ8NFJ5 357 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 APOBEC4Q8WW27 367 aaKnown RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 SEPT1Q8WYJ6 367 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 PIK3R3Q92569 461 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 DYRK2Q92630 601 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 DNASE1L2Q92874 299 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 P2RX5Q93086 422 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 AZIN2Q96A70 460 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 MAGED4Q96JG8 741 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 LRR1Q96L50 414 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 DUX3Q96PT4 197 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 PI4K2AQ9BTU6 479 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 COPS7BQ9H9Q2 264 aaPredicted RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.85□□□□□ -1.95
CD46-215ENST00000488596 ERAP1Q9NZ08 941 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 C19orf25Q9UFG5 118 aaPredicted RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 RUVBL2Q9Y230 463 aaKnown RBP2.85□□□□□ -1.95
CD46-215ENST00000488596 SPATA31D1Q6ZQQ2 1576 aa2.85□□□□□ -1.95
CD46-215ENST00000488596 A0A087WW49 117 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 TRBV4-1A0A0J9YWV2 114 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 F8VVB4 439 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 F8VWA3 439 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 H3BMM5 538 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 NR5A2O00482 541 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 PSMD14O00487 310 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 IFIT3O14879 490 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 NME6O75414 186 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 ZNF821O75541 412 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 SEC24AO95486 1093 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 SUPT20HL2P0C7V6 817 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 DLATP10515 647 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 SLC2A2P11168 524 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 ZNF26P17031 533 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 LEPRP48357 1165 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 ERVK11-1P61568 191 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 SNRPD1P62314 119 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 MYL7Q01449 175 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 FOLH1Q04609 750 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 YWHAHQ04917 246 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 E2F5Q15329 346 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 TEAD2Q15562 447 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 ZNF74Q16587 644 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 TMEM30BQ3MIR4 351 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 PDLIM3Q53GG5 364 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 CCDC158Q5M9N0 1113 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 ADAMTSL4-AS1Q5T5F5 129 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 FAM46CQ5VWP2 391 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 PSRC1Q6PGN9 363 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 PRSS55Q6UWB4 352 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 GBP6Q6ZN66 633 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 Q6ZSR9 355 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 HOOK3Q86VS8 718 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 RCOR2Q8IZ40 523 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 FAM9BQ8IZU0 186 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 GBP7Q8N8V2 638 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 SLC37A3Q8NCC5 494 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 NXPE2Q96DL1 559 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 ZNF486Q96H40 463 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 ERO1AQ96HE7 468 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 GMPPAQ96IJ6 420 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 RBM41Q96IZ5 413 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 CDCA3Q99618 268 aaPredicted RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 GPATCH1Q9BRR8 931 aaKnown RBP2.84□□□□□ -1.95
CD46-215ENST00000488596 FUCA2Q9BTY2 467 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 CDK19Q9BWU1 502 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 MTMR12Q9C0I1 747 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 P2RY12Q9H244 342 aa2.84□□□□□ -1.95
CD46-215ENST00000488596 EGLN3Q9H6Z9 239 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms