RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ABHD11Q8NFV4 315 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 SLC5A11Q8WWX8 675 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 TTC9Q92623 222 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 NEIL2Q969S2 332 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 TSNARE1Q96NA8 513 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 UBL7Q96S82 380 aaPredicted RBP15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 NLNQ9BYT8 704 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 SPNS1Q9H2V7 528 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 NMRAL1Q9HBL8 299 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 RUVBL1Q9Y265 456 aaKnown RBP15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 SLC22A14Q9Y267 594 aa15.28■□□□□ 0.04
ERGIC3-216ENST00000488384 HYKKA2RU49 373 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 C9J4A7 227 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 ATXN7O15265 892 aaPredicted RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 TAPBPO15533 448 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CREG1O75629 220 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 KRT38O76015 456 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 WDR47O94967 919 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CNTFP26441 200 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 BCL6P41182 706 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 GDF5P43026 501 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CCR8P51685 355 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 RPS15AP62244 130 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 VSNL1P62760 191 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 RPS15P62841 145 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 DCDP81605 110 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 MC1RQ01726 317 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 MEF2AQ02078 507 aaPredicted RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 RHDQ02161 417 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 IL10RAQ13651 578 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 NKAIN1Q4KMZ8 207 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CRTC2Q53ET0 693 aaPredicted RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 FBXO48Q5FWF7 155 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CATSPEREQ5SY80 951 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 FAM69BQ5VUD6 431 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 TCAIMQ8N3R3 496 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 ARHGEF39Q8N4T4 335 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 OR4K1Q8NGD4 311 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 STAG3L4Q8TBR4 150 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 RERGQ96A58 199 aaPredicted RBP15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 GPR78Q96P69 363 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 FAM117AQ9C073 453 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 WWOXQ9NZC7 414 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 NUDT4Q9NZJ9 180 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 CD274Q9NZQ7 290 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 NDOR1Q9UHB4 597 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 TLK1Q9UKI8 766 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 DYRK1BQ9Y463 629 aa15.27■□□□□ 0.04
ERGIC3-216ENST00000488384 KCNE1BA0A087WTH5 132 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 FEZF1A0PJY2 475 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 UBXN8O00124 270 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 CNOT3O75175 753 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 IPO13O94829 963 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 KLHL2O95198 593 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ONECUT2O95948 504 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 STATHP02808 62 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ALAS2P22557 587 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 GGT5P36269 586 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 GLRBP48167 497 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 EMP3P54852 163 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 REEP5Q00765 189 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 FAM83EQ2M2I3 478 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 MUM1Q2TAK8 710 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 FAM214AQ32MH5 1076 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 SULT1C3Q6IMI6 304 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 C16orf46Q6P387 395 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 COX15Q7KZN9 410 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 TMPRSS11BQ86T26 416 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 SYVN1Q86TM6 617 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 PLD6Q8N2A8 252 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 METTL27Q8N6F8 245 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ESAMQ96AP7 390 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 CABS1Q96KC9 395 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 VPS11Q9H270 941 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 FETUBQ9UGM5 382 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 PTBP2Q9UKA9 531 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 FARSAQ9Y285 508 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 ASB1Q9Y576 335 aa15.26■□□□□ 0.03
ERGIC3-216ENST00000488384 TRBC2A0A5B9 178 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 ERVH48-1M5A8F1 160 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 LCMT2O60294 686 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 SUPT3HO75486 399 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 RECKO95980 971 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 S100BP04271 92 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 ITGB2P05107 769 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 FURINP09958 794 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 MTHFD2P13995 350 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 HSPA7P48741 367 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 SNRPNP63162 240 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 CDC16Q13042 620 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 ERV3-1Q14264 604 aa15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 MRPL14Q6P1L8 145 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-216ENST00000488384 ADGRD1Q6QNK2 874 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms