RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 NUDT18Q6ZVK8 323 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 C4orf19Q8IY42 314 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 KRT78Q8N1N4 520 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PLA2G15Q8NCC3 412 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PHOSPHO1Q8TCT1 267 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PYCR2Q96C36 320 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MRPS24Q96EL2 167 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 C7orf34Q96L11 122 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 QKIQ96PU8 341 aaKnown RBP eCLIP6.17□□□□□ -1.42
SIK3-212ENST00000488337 TRNT1Q96Q11 434 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 FRMD8P1Q9BZ68 369 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 C3orf14Q9HBI5 128 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MYOZ1Q9NP98 299 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 RBAKQ9NYW8 714 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 SH3BP4Q9P0V3 963 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SEPT9Q9UHD8 586 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 TP53TG5Q9Y2B4 290 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 GOLGA4Q13439 2230 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 COL11A2P13942 1736 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 KIAA1551Q9HCM1 1747 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 TEX13CA0A0J9YWL9 993 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 CXorf49A8MYA2 514 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 G3V3Q6 166 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PIK3R2O00459 728 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PLOD3O60568 738 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PLIN3O60664 434 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SUPT7LO94864 414 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PLATP00750 562 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 CTHP32929 405 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PTPN7P35236 360 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 CCT3P49368 545 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 ALDH3A2P51648 485 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 NOMO3P69849 1222 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MEF2AQ02078 507 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 CSTF1Q05048 431 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 TKFCQ3LXA3 575 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SOWAHCQ53LP3 525 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 LAIR1Q6GTX8 287 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 C19orf48Q6RUI8 117 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 FJX1Q86VR8 437 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 RIMKLAQ8IXN7 391 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 BPIFB1Q8TDL5 484 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 AKT1S1Q96B36 256 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 FAF2Q96CS3 445 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SLITRK1Q96PX8 696 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 LGMNQ99538 433 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 C1QTNF1Q9BXJ1 281 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 C11orf54Q9H0W9 315 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 PTPRHQ9HD43 1115 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 ACOT13Q9NPJ3 140 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 KLHL1Q9NR64 748 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 ABCG2Q9UNQ0 655 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SLC6A5Q9Y345 797 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 E9PQ18 207 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 QSOX1O00391 747 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PROM1O43490 865 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PDE9AO76083 593 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MT-CYBP00156 380 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 ASGR1P07306 291 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 CNPP09543 421 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 ADRB3P13945 408 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 NFKB1P19838 968 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MSX1P28360 303 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SDHAP31040 664 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 NRIP1P48552 1158 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 NUDT6P53370 316 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 NOMO1Q15155 1222 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 MEP1AQ16819 746 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 ARMCX4Q5H9R4 360 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 CELF3Q5SZQ8 465 aaKnown RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 LRRC66Q68CR7 880 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 TMEM107Q6UX40 140 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MON1BQ7L1V2 547 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 ZNF467Q7Z7K2 595 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 AMIGO3Q86WK7 504 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 DHFR2Q86XF0 187 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 FAM217AQ8IXS0 508 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 TTC29Q8NA56 475 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 HBEGFQ99075 208 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 TREX2Q9BQ50 279 aaPredicted RBP6.17□□□□□ -1.42
SIK3-212ENST00000488337 SLC30A2Q9BRI3 323 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 MARVELD1Q9BSK0 173 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.17□□□□□ -1.42
SIK3-212ENST00000488337 METTL9Q9H1A3 318 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 ST6GALNAC4Q9H4F1 302 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SPAG4Q9NPE6 437 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 FAM118AQ9NWS6 357 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 IMPAD1Q9NX62 359 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PISDQ9UG56 409 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 A0A1W2PQ09 198 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 TCRBV7S3A2A0A539 114 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 DHRS12A0PJE2 317 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 SLC28A1O00337 649 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 PER2O15055 1255 aa6.17□□□□□ -1.42
SIK3-212ENST00000488337 UGDHO60701 494 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms