RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
COL16A1-214ENST00000488128 CCDC88CQ9P219 2028 aa13.75□□□□□ -0.21
COL16A1-214ENST00000488128 CLCA1A8K7I4 914 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CENPBD1B2RD01 187 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CBX4O00257 560 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CDK1P06493 297 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CKMT1AP12532 417 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 LPOP22079 712 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 POU1F1P28069 291 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 PTPN6P29350 595 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 WEE1P30291 646 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 TTPAP49638 278 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 KCNQ1P51787 676 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 GPR50Q13585 617 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SLC5A8Q8N695 610 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 TRIB3Q96RU7 358 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 NUDT4Q9NZJ9 180 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 A0A1W2PQ09 198 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SOX6P35712 828 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 GNG2P59768 71 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 TTC23LQ6PF05 361 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 ATAD1Q8NBU5 361 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 GLB1L3Q8NCI6 653 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SKA2Q8WVK7 121 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SELENOMQ8WWX9 145 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 APIPQ96GX9 242 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 NIPSNAP1Q9BPW8 284 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 CINPQ9BW66 212 aaPredicted RBP13.74□□□□□ -0.21
COL16A1-214ENST00000488128 ABCB8Q9NUT2 735 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 TMEM39AQ9NV64 488 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
COL16A1-214ENST00000488128 SMLR1H3BR10 107 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 MANBAO00462 879 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 B4GALT3O60512 393 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 PRAMEF11O60813 436 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ERN1O75460 977 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 KCNK5O95279 499 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ALPIP09923 528 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 RPS24P62847 133 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 HOXC5Q00444 222 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ABHD18Q0P651 414 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 INO80DQ53TQ3 878 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 C17orf99Q6UX52 265 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ZNF605Q86T29 641 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 CCDC190Q86UF4 302 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 SERINC5Q86VE9 423 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ELMOD2Q8IZ81 293 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 OR9Q2Q8NGE9 314 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 JPH3Q8WXH2 748 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 SLC39A13Q96H72 371 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 KCNH6Q9H252 994 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 COQ3Q9NZJ6 369 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 Q9Y3F1 56 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 A0A0X1KG70 313 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 EFCAB10A6NFE3 127 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 OR6C70A6NIJ9 312 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 CRYZL1O95825 349 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 RPS19P39019 145 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 TBCEQ15813 527 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 VMACQ2NL98 169 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 UAP1L1Q3KQV9 507 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 C10orf62Q5T681 223 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 KCNJ9Q92806 393 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 MYDGFQ969H8 173 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 COQ8BQ96D53 544 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 HRASLS5Q96KN8 279 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 C1orf74Q96LT6 269 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 PKMYT1Q99640 499 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 MGLLQ99685 303 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 CARD8Q9Y2G2 431 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 PRSS21Q9Y6M0 314 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 WASH4PA8MWX3 477 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 FPGTO14772 594 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 GPX5O75715 221 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 SLC25A14O95258 325 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 TAF1AQ15573 450 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 KLHL17Q6TDP4 642 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ABI3BPQ7Z7G0 1075 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 BHMTQ93088 406 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 MCCC1Q96RQ3 725 aaPredicted RBP13.73□□□□□ -0.21
COL16A1-214ENST00000488128 BARHL1Q9BZE3 327 aa13.73□□□□□ -0.21
COL16A1-214ENST00000488128 ANKHQ9HCJ1 492 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms