RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PRPF31Q8WWY3 499 aaKnown RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 SERAC1Q96JX3 654 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 TREX2Q9BQ50 279 aaPredicted RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 CHCHD6Q9BRQ6 235 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 ANAPC11Q9NYG5 84 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 DDX25Q9UHL0 483 aaKnown RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 SLC24A2Q9UI40 661 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 CPSF3Q9UKF6 684 aaKnown RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 IGHV3-20A0A0C4DH32 117 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 IQCMA0A1B0GVH7 501 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 SH3BGRLO75368 114 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 CSH1P0DML2 217 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 CSH2P0DML3 217 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 LHX1P48742 406 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 NAP1L1P55209 391 aaKnown RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 ERVK-16P61578 105 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 EPS8Q12929 822 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 CHAF1BQ13112 559 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 KIAA0141Q14154 515 aaPredicted RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 OPCMLQ14982 345 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 PRR30Q53SZ7 412 aaPredicted RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 Q6ZVH6 145 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 LINC00346Q8IVM7 164 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 CD177Q8N6Q3 437 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 RTL3Q8N8U3 475 aaKnown RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 TSPAN14Q8NG11 270 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 SPPL2AQ8TCT8 520 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 SLC22A18Q96BI1 424 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 PTERQ96BW5 349 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 CDCA3Q99618 268 aaPredicted RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 PRMT7Q9NVM4 692 aaPredicted RBP2.97□□□□□ -1.93
CCDC66-221ENST00000487739 HAUS2Q9NVX0 235 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 GDE1Q9NZC3 331 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 NYAP2Q9P242 653 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF69Q9UC07 566 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 RPS6KL1Q9Y6S9 549 aa2.97□□□□□ -1.93
CCDC66-221ENST00000487739 ITIH6Q6UXX5 1313 aa2.96□□□□□ -1.93
CCDC66-221ENST00000487739 ENTPD3O75355 529 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 SAGP10523 405 aaPredicted RBP2.96□□□□□ -1.94
CCDC66-221ENST00000487739 PKLRP30613 574 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 CETN2P41208 172 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 NPTX1Q15818 432 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 ALDH1L2Q3SY69 923 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 REG3GQ6UW15 175 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 IL17RELQ6ZVW7 336 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 TAGAPQ8N103 731 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 RYBPQ8N488 228 aaPredicted RBP2.96□□□□□ -1.94
CCDC66-221ENST00000487739 CSNK1G2-AS1Q8NCQ2 148 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 JAKMIP2Q96AA8 810 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 TMCO6Q96DC7 493 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 DNAI2Q9GZS0 605 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 GOLPH3LQ9H4A5 285 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 ZHX3Q9H4I2 956 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 EGLN3Q9H6Z9 239 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 ANKZF1Q9H8Y5 726 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 CDH20Q9HBT6 801 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 HACD3Q9P035 362 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 ZNF581Q9P0T4 197 aa2.96□□□□□ -1.94
CCDC66-221ENST00000487739 CASTOR2A6NHX0 329 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 GLOD5A6NK44 160 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 SNX3O60493 162 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 CAPN3P20807 821 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 HOXD13P35453 343 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 DRD3P35462 400 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 NDUFV3P56181 108 aaKnown RBP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 CAPRIN1Q14444 709 aaKnown RBP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 WTAPQ15007 396 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 UPP1Q16831 310 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 FGD3Q5JSP0 725 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 CTR9Q6PD62 1173 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 C4orf50Q6ZRC1 276 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 C1orf122Q6ZSJ8 110 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 RCOR2Q8IZ40 523 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 PARP8Q8N3A8 854 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 TCEANCQ8N8B7 351 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 C4orf32Q8N8J7 132 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 RASGEF1AQ8N9B8 481 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 AGAP11Q8TF27 550 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 SKA1Q96BD8 255 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 RSRC1Q96IZ7 334 aaKnown RBP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 ZIM3Q96PE6 472 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 BTBD9Q96Q07 612 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 RBM24Q9BX46 236 aaKnown RBP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 RNF150Q9ULK6 438 aa2.95□□□□□ -1.94
CCDC66-221ENST00000487739 PPIEQ9UNP9 301 aaKnown RBP2.95□□□□□ -1.94
CCDC66-221ENST00000487739 FSD2A1L4K1 749 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 PDHXO00330 501 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 CYTIPO60759 359 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 MTRF1O75570 445 aaKnown RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 GJB3O75712 270 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 FDPSP14324 419 aaKnown RBP2.94□□□□□ -1.94
CCDC66-221ENST00000487739 EPCAMP16422 314 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ZBTB25P24278 435 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 EDNRAP25101 427 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 ASCL1P50553 236 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 HLCSP50747 726 aa2.94□□□□□ -1.94
CCDC66-221ENST00000487739 GEMIN4P57678 1058 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms