RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FRMD6-AS1P0C7T7 363 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 PIK3R1P27986 724 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 HNF4AP41235 474 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
SMC4-218ENST00000486711 VEGFCP49767 419 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 MYL7Q01449 175 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SQLEQ14534 574 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 KIAA1644Q3SXP7 199 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 CEACAM20Q6UY09 585 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SH2D5Q6ZV89 423 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 ANKRD46Q86W74 232 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 MEX3DQ86XN8 651 aaKnown RBP4.11□□□□□ -1.75
SMC4-218ENST00000486711 APCDD1Q8J025 514 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SPC24Q8NBT2 197 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 DBF4BQ8NFT6 615 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 OR10V1Q8NGI7 309 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 PSMA8Q8TAA3 256 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 CKAP2Q8WWK9 683 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 FCAMRQ8WWV6 532 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SUSD6Q92537 303 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 FBXO17Q96EF6 278 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 CCDC3Q9BQI4 270 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SLC5A7Q9GZV3 580 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SRD5A3Q9H8P0 318 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 CWC25Q9NXE8 425 aaPredicted RBP4.11□□□□□ -1.75
SMC4-218ENST00000486711 SLC12A6Q9UHW9 1150 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 KCNJ14Q9UNX9 436 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 SNX5Q9Y5X3 404 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 ACEP12821 1306 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 IL16Q14005 1332 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 TRIM64A6NGJ6 449 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 TRIM64BA6NI03 449 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 FAM72CH0Y354 149 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SLC22A2O15244 555 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 PCDH7O60245 1069 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 GLRA3O75311 464 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 DDHD2O94830 711 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 GP1BBP13224 206 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SSTR1P30872 391 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 NKX2-1P43699 371 aaPredicted RBP4.1□□□□□ -1.75
SMC4-218ENST00000486711 IER3P46695 156 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 GCNT1Q02742 428 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 UBXN1Q04323 297 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 TEFQ10587 303 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 C2orf76Q3KRA6 126 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 GTDC1Q4AE62 458 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 FAM72AQ5TYM5 149 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SUSD4Q5VX71 490 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 FAM72DQ6L9T8 149 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SLC16A9Q7RTY1 509 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 PIGZQ86VD9 579 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 FAM72BQ86X60 149 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 CREBRFQ8IUR6 639 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SIAH3Q8IW03 269 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 KLHDC1Q8N7A1 406 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 GIMAP5Q96F15 307 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 C4orf45Q96LM5 186 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 BTBD9Q96Q07 612 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 ATG101Q9BSB4 218 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 NACAP1Q9BZK3 213 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 ZNF350Q9GZX5 532 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 SIX2Q9NPC8 291 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 INTS9Q9NV88 658 aaKnown RBP4.1□□□□□ -1.75
SMC4-218ENST00000486711 OR6C2Q9NZP2 312 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 CNIH4Q9P003 139 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 ZNF624Q9P2J8 865 aaPredicted RBP4.1□□□□□ -1.75
SMC4-218ENST00000486711 TRPC4Q9UBN4 977 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 PA2G4Q9UQ80 394 aaKnown RBP4.1□□□□□ -1.75
SMC4-218ENST00000486711 GAB2Q9UQC2 676 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 C2CD2Q9Y426 696 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 HEG1Q9ULI3 1381 aa4.1□□□□□ -1.75
SMC4-218ENST00000486711 TRAV18A0A075B6X5 111 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 NPIPA3F8WFD2 350 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 SLC16A8O95907 504 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 CLPTM1O96005 669 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 NGFP01138 241 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 SP9P0CG40 484 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 PRKAR1AP10644 381 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 CYP2A7P20853 494 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 CTNNB1P35222 781 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 MAGEA11P43364 429 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 DNA2P51530 1060 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 AKAP17AQ02040 695 aaKnown RBP4.09□□□□□ -1.75
SMC4-218ENST00000486711 P2RY6Q15077 328 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 XKR3Q5GH77 459 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 LRRC38Q5VT99 294 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 UGT3A1Q6NUS8 523 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 IL17RELQ6ZVW7 336 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 MARK2Q7KZI7 788 aaKnown RBP4.09□□□□□ -1.75
SMC4-218ENST00000486711 KCTD9Q7L273 389 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 GPR141Q7Z602 305 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 CCDC60Q8IWA6 550 aaPredicted RBP4.09□□□□□ -1.75
SMC4-218ENST00000486711 RCOR2Q8IZ40 523 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 KIRREL3Q8IZU9 778 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 PRSS35Q8N3Z0 413 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms