RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 METTL21CQ5VZV1 264 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 CAPRIN2Q6IMN6 1127 aaKnown RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 NAPRTQ6XQN6 538 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 AFAP1L2Q8N4X5 818 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 PHC3Q8NDX5 983 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ACVR1CQ8NER5 493 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 OR4E2Q8NGC2 313 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RFWD2Q8NHY2 731 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RHEBL1Q8TAI7 183 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 DTX3LQ8TDB6 740 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 LPGAT1Q92604 370 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 INPP5DQ92835 1189 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 NXNL1Q96CM4 212 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 FAR2Q96K12 515 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 CNDP1Q96KN2 507 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 EFHD1Q9BUP0 239 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RAB33BQ9H082 229 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 TFB2MQ9H5Q4 396 aaKnown RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ASB8Q9H765 288 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 KCNK13Q9HB14 408 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 EML4Q9HC35 981 aaKnown RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 LUZP4Q9P127 313 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ANKMY1Q9P2S6 941 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ZFP69BQ9UJL9 534 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 DCTN4Q9UJW0 460 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RARRES3Q9UL19 164 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RAP2CQ9Y3L5 183 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 MED13Q9UHV7 2174 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 UBA6A0AVT1 1052 aaPredicted RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CLEC18AA5D8T8 446 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MGAT4DA6NG13 374 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ARGFXA6NJG6 315 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 SLC9B1P1A6NJY1 282 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 H0YHG0 523 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 BTN3A3O00478 584 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 VPS26AO75436 327 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 SRP72O76094 671 aaKnown RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 SERPINA6P08185 405 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CCDC166P0CW27 439 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 TPBGLP0DKB5 382 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PKMP14618 531 aaKnown RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PVRP15151 417 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ITGALP20701 1170 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PDHA2P29803 388 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MC4RP32245 332 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MC1RQ01726 317 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ABRQ12979 859 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CSHL1Q14406 222 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 NADK2Q4G0N4 442 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 RBM20Q5T481 1227 aaKnown RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CLEC18BQ6UXF7 455 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ASB18Q6ZVZ8 466 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 SNX20Q7Z614 316 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CLNKQ7Z7G1 428 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 D2HGDHQ8N465 521 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 LMNTD1Q8N9Z9 388 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CLEC18CQ8NCF0 446 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 OR2L2Q8NH16 312 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 HEXDCQ8WVB3 486 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 KCNJ9Q92806 393 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MIB2Q96AX9 1013 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF501Q96CX3 271 aaPredicted RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ERP27Q96DN0 273 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF514Q96K75 400 aaPredicted RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 TMEM237Q96Q45 408 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 RAB3IPQ96QF0 476 aaPredicted RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 OLFM1Q99784 485 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 GATA5Q9BWX5 397 aaPredicted RBP9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 DERL2Q9GZP9 239 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MYLK2Q9H1R3 596 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CHST8Q9H2A9 424 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 XKR8Q9H6D3 395 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 FGF21Q9NSA1 209 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 KLHL42Q9P2K6 505 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 XPR1Q9UBH6 696 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 ANAPC2Q9UJX6 822 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 POLHQ9Y253 713 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 MAN2B2Q9Y2E5 1009 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PCDHGA6Q9Y5G7 932 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 PRSS21Q9Y6M0 314 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 CCDC88CQ9P219 2028 aa9.05□□□□□ -0.96
TMEM39A-208ENST00000486159 TRBV5-4A0A0C4DH59 114 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 GOLGA8QA0A0J9YX86 632 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 GOLGA8OA6NCC3 632 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 TLCD2A6NGC4 264 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 OR51F1A6NGY5 319 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ENO4A6NNW6 628 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SYCE1LA8MT33 242 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 GOLGA8NF8WBI6 632 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SLC22A2O15244 555 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 DLX3O60479 287 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SMIM24O75264 130 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SCRG1O75711 98 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 IPO13O94829 963 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms