RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SHISA6Q6ZSJ9 500 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 NLRP9Q7RTR0 991 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 GLT6D1Q7Z4J2 308 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 SLC26A11Q86WA9 606 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 TRAPPC5Q8IUR0 188 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 RAVER1Q8IY67 606 aaKnown RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 KRT222Q8N1A0 295 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 STYXQ8WUJ0 223 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 NAT14Q8WUY8 206 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 HDAC10Q969S8 669 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 ZFYVE1Q9HBF4 777 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 MAGEE1Q9HCI5 957 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 C1GALT1Q9NS00 363 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 IARS2Q9NSE4 1012 aaKnown RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 HACD3Q9P035 362 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 SERTAD3Q9UJW9 196 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 PSAT1Q9Y617 370 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 HCFC1P51610 2035 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 HMX2A2RU54 273 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CCDC162PA2VCL2 907 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 OR51F1A6NGY5 319 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 BTN3A3O00478 584 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 GPR39O43194 453 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CRTAMO95727 393 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 SLC4A1P02730 911 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 C8BP07358 591 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 INHBAP08476 426 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CREB1P16220 341 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 PAMP19021 973 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 SOX11P35716 441 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 GABRA4P48169 554 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
SND1-213ENST00000486037 DCDP81605 110 aaKnown RBP9.38□□□□□ -0.91
SND1-213ENST00000486037 ZIC1Q15915 447 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 INAQ16352 499 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.919e-9■■■■□ 21.4
SND1-213ENST00000486037 NKAIN1Q4KMZ8 207 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 C3P1Q6ZMU1 363 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 BIVMQ86UB2 503 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 TRABD2AQ86V40 505 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CNTN4Q8IWV2 1026 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 NDUFAF2Q8N183 169 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CARFQ8N187 725 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 TRAM1L1Q8N609 369 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 OR4E2Q8NGC2 313 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 OR4K2Q8NGD2 314 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 PSMF1Q92530 271 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CDKL2Q92772 493 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 PEX13Q92968 403 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 CDKN2AIPNLQ96HQ2 116 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 LMF1Q96S06 567 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 PITPNM3Q9BZ71 974 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 IL17CQ9P0M4 197 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 ZNF180Q9UJW8 692 aa9.38□□□□□ -0.91
SND1-213ENST00000486037 TRAV17A0A0B4J275 112 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 A0A1W2PPM1 405 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 GSAPA4D1B5 854 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 C2orf81A6NN90 581 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 BTN3A1O00481 513 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 ADAM10O14672 748 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 VEGFDO43915 354 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 POP7O75817 140 aaKnown RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 GOT2P00505 430 aaKnown RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 HBQ1P09105 142 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 PRSS56P0CW18 603 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 GABRB3P28472 473 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 PBLDP30039 288 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 PRDX3P30048 256 aaKnown RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 GP5P40197 560 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 SERPINB9P50453 376 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 MPP1Q00013 466 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 TFF3Q07654 80 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 DMPKQ09013 629 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 TMEM115Q12893 351 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 CTBP1Q13363 440 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 THOC5Q13769 683 aaKnown RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 SEMA3AQ14563 771 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 NEPROQ6NW34 567 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 Q6ZPB1 254 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 COX15Q7KZN9 410 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 STRA8Q7Z7C7 330 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 TRIM73Q86UV7 250 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 DENND6AQ8IWF6 608 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 ZNF655Q8N720 491 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 WFDC11Q8NEX6 87 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 OR11G2Q8NGC1 345 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 OR6P1Q8NGX9 317 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 DNAJB8Q8NHS0 232 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 SDCCAG3Q96C92 435 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 PKNOX2Q96KN3 472 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms