RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 FAM181AQ8N9Y4 354 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 OR2L3Q8NG85 312 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 OR4K1Q8NGD4 311 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 WDR20Q8TBZ3 569 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 TWIST2Q8WVJ9 160 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 ATP6V1E2Q96A05 226 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 MAGEB10Q96LZ2 347 aaPredicted RBP10.89□□□□□ -0.67
SND1-212ENST00000485871 C3orf30Q96M34 536 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 ACAT2Q9BWD1 397 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 NUF2Q9BZD4 464 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 SRMSQ9H3Y6 488 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 ACTR8Q9H981 624 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 PELI2Q9HAT8 420 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 CUEDC1Q9NWM3 386 aaPredicted RBP10.89□□□□□ -0.67
SND1-212ENST00000485871 ACTR10Q9NZ32 417 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 FIS1Q9Y3D6 152 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 DYRK1BQ9Y463 629 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 CCL27Q9Y4X3 112 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 PTGDR2Q9Y5Y4 395 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 RNF215Q9Y6U7 377 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
SND1-212ENST00000485871 SERTM1A2A2V5 107 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 PIPSLA2A3N6 862 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 OR6C74A6NCV1 312 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 OR5K3A6NET4 321 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 H0YIV9 168 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 GIPC1O14908 333 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 PIP5K1BO14986 540 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 GSC2O15499 205 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 NUDT21O43809 227 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 NRP2O60462 931 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 DIAPH2O60879 1101 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 SKAP2O75563 359 aaPredicted RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 ZNF806P0C7X5 589 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 PRR35P0CG20 571 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 GLB1P16278 677 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 UGT2B7P16662 529 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 HNF4AP41235 474 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 EPHA4P54764 986 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 CSNK1G2P78368 415 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 ABATP80404 500 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 REEP5Q00765 189 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 TSTA3Q13630 321 aaPredicted RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 PLCL1Q15111 1095 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 XKR6Q5GH73 641 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 KIAA1614Q5VZ46 1190 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 FAM20CQ8IXL6 584 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 LAS2Q8IYD9 372 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 OR2T11Q8NH01 316 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 METTL6Q8TCB7 284 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 SH3KBP1Q96B97 665 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 APOLD1Q96LR9 279 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 ANKRD27Q96NW4 1050 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 EFCAB11Q9BUY7 163 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 DUSP23Q9BVJ7 150 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 TCF7L2Q9NQB0 619 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 FARSBQ9NSD9 589 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 EVA1BQ9NVM1 165 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 GEMIN8Q9NWZ8 242 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 NDE1Q9NXR1 346 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 ZNF490Q9ULM2 529 aaPredicted RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 TSC22D4Q9Y3Q8 395 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 KLK4Q9Y5K2 254 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 ENTPD2Q9Y5L3 495 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
SND1-212ENST00000485871 ASXL3Q9C0F0 2248 aa10.88□□□□□ -0.67
SND1-212ENST00000485871 NPIPB8E9PQR5 432 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 MANBAO00462 879 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
SND1-212ENST00000485871 FFAR3O14843 346 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 GPR42O15529 346 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 TNFSF14O43557 240 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 SIGLEC6O43699 453 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 CIB2O75838 187 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 MYF5P13349 255 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 POLR2CP19387 275 aaPredicted RBP10.87□□□□□ -0.67
SND1-212ENST00000485871 HMOX2P30519 316 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 LSSP48449 732 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 RAP1GDS1P52306 607 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 PPP1CAP62136 330 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 ZNF33BQ06732 778 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 SLBPQ14493 270 aaKnown RBP eCLIP10.87□□□□□ -0.67
SND1-212ENST00000485871 ABRAXAS2Q15018 415 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 HERC3Q15034 1050 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 CPSF6Q16630 551 aaKnown RBP eCLIP10.87□□□□□ -0.67
SND1-212ENST00000485871 SLC5A12Q1EHB4 618 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 PROX2Q3B8N5 592 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 ADNP2Q6IQ32 1131 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 Q6ZSR9 355 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 LARP4Q71RC2 724 aaKnown RBP eCLIP10.87□□□□□ -0.679e-8■■□□□ 14
SND1-212ENST00000485871 EFL1Q7Z2Z2 1120 aaKnown RBP10.87□□□□□ -0.67
SND1-212ENST00000485871 TRIM46Q7Z4K8 759 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 VN1R5Q7Z5H4 357 aa10.87□□□□□ -0.67
SND1-212ENST00000485871 OOSP2Q86WS3 158 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms