RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 GPS2Q13227 327 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 SLBPQ14493 270 aaKnown RBP eCLIP11.36□□□□□ -0.59
APTX-227ENST00000485479 IL11RAQ14626 422 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 RASA2Q15283 850 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 XKR6Q5GH73 641 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 GOLGA7Q7Z5G4 137 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 CARFQ8N187 725 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 RIBC1Q8N443 379 aaPredicted RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 BANPQ8N9N5 519 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ANKRD53Q8N9V6 530 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 OR52B6Q8NGF0 335 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 CLIP3Q96DZ5 547 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 FAM111AQ96PZ2 611 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 OR2A5Q96R48 311 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 MECRQ9BV79 373 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 TMEM109Q9BVC6 243 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ASPSCR1Q9BZE9 553 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 SLC7A5P2Q9GIP4 190 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 CNOT10Q9H9A5 744 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 ZBTB26Q9HCK0 441 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 MLXIPLQ9NP71 852 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 SEMA4BQ9NPR2 832 aaPredicted RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 MRPS2Q9Y399 296 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 MAU2Q9Y6X3 613 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ATMQ13315 3056 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 G3V2L1 256 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 AGPSO00116 658 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 KLK8O60259 260 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 PLIN3O60664 434 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SMIM24O75264 130 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 PROCP04070 461 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 ALAS2P22557 587 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 CCR8P51685 355 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 NFKB2Q00653 900 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SLC18A2Q05940 514 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 DOC2AQ14183 400 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 NXPE4Q6UWF7 544 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 TTLL10Q6ZVT0 673 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 EXOC3L1Q86VI1 746 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 GPR135Q8IZ08 494 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 LSMEM2Q8N112 164 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 TCAIMQ8N3R3 496 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 ZCCHC10Q8TBK6 192 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 TCP10LQ8TDR4 215 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 FGF11Q92914 225 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 APOPT1Q96IL0 206 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 ZNF578Q96N58 590 aaPredicted RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 PCBD2Q9H0N5 130 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 ACTR5Q9H9F9 607 aaPredicted RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 PRM3Q9NNZ6 103 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 TMEM184CQ9NVA4 438 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 GEMIN8Q9NWZ8 242 aaKnown RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 NDOR1Q9UHB4 597 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SERTAD3Q9UJW9 196 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SNX7Q9UNH6 387 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 RUVBL1Q9Y265 456 aaKnown RBP11.35□□□□□ -0.59
APTX-227ENST00000485479 ANGPTL3Q9Y5C1 460 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 PCDHGA7Q9Y5G6 932 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 PCDHGA3Q9Y5H0 932 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 SEC16AO15027 2179 aa11.35□□□□□ -0.59
APTX-227ENST00000485479 CCDC88CQ9P219 2028 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 K7EPI3 171 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 KLK10O43240 276 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 SASH3O75995 380 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 EZRP15311 586 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 GNAZP19086 355 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CRHR1P34998 444 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CCT5P48643 541 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 PCBP4P57723 403 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 ERVPABLB-1P60509 514 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CHIT1Q13231 466 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 GTF2H2Q13888 395 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
APTX-227ENST00000485479 GTF2H2CQ6P1K8 395 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 PRSS41Q7RTY9 318 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 LRRC70Q7Z2Q7 622 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 PROSER1Q86XN7 944 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.34□□□□□ -0.59
APTX-227ENST00000485479 CSNK1A1LQ8N752 337 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 KCT2Q8NC54 265 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 ABHD11Q8NFV4 315 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CRELD1Q96HD1 420 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 SMC6Q96SB8 1091 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 SHCBP1LQ9BZQ2 653 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 IQCGQ9H095 443 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 DCDC2Q9UHG0 476 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 PCTPQ9UKL6 214 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 KLK4Q9Y5K2 254 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 MRPS18BQ9Y676 258 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 NDUFS4O43181 175 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 IPO13O94829 963 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms