RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 RNF112Q9ULX5 631 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 KCNE2Q9Y6J6 123 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
UPF3A-208ENST00000484246 LAMA5O15230 3695 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TRBC2A0A5B9 178 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TRIM49D1C9J1S8 452 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 C9J4A7 227 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TAPBPO15533 448 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 KLK8O60259 260 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 MTHFD2P13995 350 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TCN2P20062 427 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 ITGAXP20702 1163 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 PTPN4P29074 926 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 KCNC1P48547 511 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 DCDP81605 110 aaKnown RBP15.17■□□□□ 0.02
UPF3A-208ENST00000484246 REEP5Q00765 189 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 RHDQ02161 417 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 NCF4Q15080 339 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TSNAXIP1Q2TAA8 658 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TECRLQ5HYJ1 363 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 PRMT9Q6P2P2 845 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 KLC3Q6P597 504 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 LRRC70Q7Z2Q7 622 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 VN1R4Q7Z5H5 301 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 TDRPQ86YL5 185 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 AENQ8WTP8 325 aaKnown RBP15.17■□□□□ 0.02
UPF3A-208ENST00000484246 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 RERGQ96A58 199 aaPredicted RBP15.17■□□□□ 0.02
UPF3A-208ENST00000484246 FKBP10Q96AY3 582 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 C10orf90Q96M02 699 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 CCDC77Q9BR77 488 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 CAPS2Q9BXY5 557 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 EHD1Q9H4M9 534 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 ABCF3Q9NUQ8 709 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 IRAK4Q9NWZ3 460 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 WWOXQ9NZC7 414 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 COPG2Q9UBF2 871 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 DHCR7Q9UBM7 475 aaKnown RBP15.17■□□□□ 0.02
UPF3A-208ENST00000484246 SLC22A14Q9Y267 594 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 DYRK1BQ9Y463 629 aa15.17■□□□□ 0.02
UPF3A-208ENST00000484246 FAM208BQ5VWN6 2430 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 IQANK1A0A1B0GTG1 560 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 HYKKA2RU49 373 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 WDR47O94967 919 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 ITGB2P05107 769 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 CD63P08962 238 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 GRK3P35626 688 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 PCDH1Q08174 1060 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 CDC20Q12834 499 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 E2F2Q14209 437 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 NKAIN1Q4KMZ8 207 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 ARHGAP40Q5TG30 622 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 LCN10Q6JVE6 187 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 METTL2BQ6P1Q9 378 aaKnown RBP15.16■□□□□ 0.02
UPF3A-208ENST00000484246 NXPE4Q6UWF7 544 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 MFSD9Q8NBP5 474 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 ACMSDQ8TDX5 336 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 MZB1Q8WU39 189 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 CAVIN3Q969G5 261 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 ALKBH8Q96BT7 664 aaKnown RBP15.16■□□□□ 0.02
UPF3A-208ENST00000484246 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 RNF31Q96EP0 1072 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 WDR34Q96EX3 536 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 CATSPER2Q96P56 530 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 MFRPQ9BY79 579 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 PITHD1Q9GZP4 211 aaPredicted RBP15.16■□□□□ 0.02
UPF3A-208ENST00000484246 ACTL8Q9H568 366 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 DNAJC11Q9NVH1 559 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 CD274Q9NZQ7 290 aa15.16■□□□□ 0.02
UPF3A-208ENST00000484246 RUVBL1Q9Y265 456 aaKnown RBP15.16■□□□□ 0.02
UPF3A-208ENST00000484246 NCF1BA6NI72 391 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 NCF1CA8MVU1 366 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 P2RX6O15547 441 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 CREG1O75629 220 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 RFPL1O75677 317 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 STK16O75716 305 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 MED26O95402 600 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 ALBP02768 609 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 S100BP04271 92 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 TUBBP07437 444 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 NUDT17P0C025 328 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 NCF1P14598 390 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 GNAZP19086 355 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 GSTM2P28161 218 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 AHRP35869 848 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 BCL6P41182 706 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 SCTRP47872 440 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 RPS15P62841 145 aaKnown RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 CDC16Q13042 620 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 FAM53BQ14153 422 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 MRPL14Q6P1L8 145 aaKnown RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 FAM199XQ6PEV8 388 aaPredicted RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 SLCO4C1Q6ZQN7 724 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 TTLL10Q6ZVT0 673 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 TMPRSS11BQ86T26 416 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 PLD3Q8IV08 490 aa15.15■□□□□ 0.02
UPF3A-208ENST00000484246 PLD6Q8N2A8 252 aaKnown RBP15.15■□□□□ 0.02
UPF3A-208ENST00000484246 TBC1D19Q8N5T2 526 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms