RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PELI2Q9HAT8 420 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 KCNK12Q9HB15 430 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 WASH6PQ9NQA3 447 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 FAM120CQ9NX05 1096 aaKnown RBP12.75□□□□□ -0.37
CPNE1-225ENST00000483495 AURKCQ9UQB9 309 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 NCKAP1Q9Y2A7 1128 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 WDR37Q9Y2I8 494 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 TDRKHQ9Y2W6 561 aaKnown RBP12.75□□□□□ -0.37
CPNE1-225ENST00000483495 CACNB4O00305 520 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SCAMP2O15127 329 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ANXA4P09525 319 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 FCGR1AP12314 374 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 CDH1P12830 882 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 GLULP15104 373 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 RPL10P27635 214 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 FOLH1Q04609 750 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 MED21Q13503 144 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 MLF2Q15773 248 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 FBXO43Q4G163 708 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 OR4F3Q6IEY1 312 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 DNAJC14Q6Y2X3 702 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 AMIGO2Q86SJ2 522 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 KRT78Q8N1N4 520 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 DENND6BQ8NEG7 585 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ABHD11Q8NFV4 315 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 OR7A2PQ8NGA2 310 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 OR10A6Q8NH74 314 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 NELL1Q92832 810 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 GFM2Q969S9 779 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 CXorf40BQ96DE9 158 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 GBP5Q96PP8 586 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 INSM2Q96T92 566 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SEMA6AQ9H2E6 1030 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PRO3102Q9H379 93 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PIF1Q9H611 641 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ANAPC2Q9UJX6 822 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 CFAP20Q9Y6A4 193 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 F5P12259 2224 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 A0A1W2PPV9 198 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 FAM220BPB1ANY3 271 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 RFXANKO14593 260 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 AKAP10O43572 662 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PCDH7O60245 1069 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ANXA6P08133 673 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 COX7A2P14406 83 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 FASP25445 335 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 CDKN2CP42773 168 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 POLE2P56282 527 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 KIAA1024LP59773 190 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PHEXP78562 749 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SF1Q15637 639 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 TMIGD1Q6UXZ0 262 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ARMCX6Q7L4S7 300 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 VN1R5Q7Z5H4 357 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ANKRD46Q86W74 232 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 TRIM69Q86WT6 500 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PPWD1Q96BP3 646 aaKnown RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 COQ8BQ96D53 544 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ZNF597Q96LX8 424 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 PITHD1Q9GZP4 211 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 RHBGQ9H310 441 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 SUFUQ9UMX1 484 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
CPNE1-225ENST00000483495 ELOVL7A1L3X0 281 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-225ENST00000483495 SLC31A1O15431 190 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 B3GALT4O96024 378 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MEF2AQ02078 507 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-225ENST00000483495 CCINQ13939 588 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MAP7Q14244 749 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 EOGTQ5NDL2 527 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 IER5LQ5T953 404 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 INTS11Q5TA45 600 aaKnown RBP12.73□□□□□ -0.37
CPNE1-225ENST00000483495 DUS1LQ6P1R4 473 aaKnown RBP12.73□□□□□ -0.37
CPNE1-225ENST00000483495 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MICU2Q8IYU8 434 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 METTL4Q8N3J2 472 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MARVELD2Q8N4S9 558 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 ZNF740Q8NDX6 193 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 GPR156Q8NFN8 814 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MIEF2Q96C03 454 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 CENPNQ96H22 339 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-225ENST00000483495 C12orf66Q96MD2 445 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 Q9H521 79 aa12.73□□□□□ -0.37
CPNE1-225ENST00000483495 NT5DC2Q9H857 520 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms