RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 BOP1Q14137 746 aaKnown RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 TAZQ16635 292 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 GPR33Q49SQ1 333 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 C1orf189Q5VU69 101 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 RHBDD2Q6NTF9 364 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SPESP1Q6UW49 350 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 RANBP10Q6VN20 620 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CDHR3Q6ZTQ4 885 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CDKL3Q8IVW4 592 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 RCOR2Q8IZ40 523 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ADGRF3Q8IZF5 1079 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 SLC34A3Q8N130 599 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 OR13C4Q8NGS5 318 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PHOSPHO1Q8TCT1 267 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 DENND1AQ8TEH3 1009 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 NAT14Q8WUY8 206 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 UBE2Q2Q8WVN8 375 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 NACC2Q96BF6 587 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PTERQ96BW5 349 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 VPS50Q96JG6 964 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 GBP5Q96PP8 586 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 APOL2Q9BQE5 337 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 NDC1Q9BTX1 674 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CD244Q9BZW8 370 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 CHRNA10Q9GZZ6 450 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 OR52A5Q9H2C5 316 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 XKR8Q9H6D3 395 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF552Q9H707 407 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ZMAT4Q9H898 229 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 NHEJ1Q9H9Q4 299 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 TCF7L1Q9HCS4 588 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 PRDM7Q9NQW5 492 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ABHD10Q9NUJ1 306 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 P4HTMQ9NXG6 502 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 POLG2Q9UHN1 485 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 FEZ2Q9UHY8 353 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-207ENST00000483407 INTUQ9ULD6 942 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 ASF1AQ9Y294 204 aa5.65□□□□□ -1.5
CSDE1-207ENST00000483407 RP1L1Q8IWN7 2480 aaPredicted RBP5.65□□□□□ -1.51
CSDE1-207ENST00000483407 IGLV3-16A0A075B6K0 115 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 A0A0J9YY10 115 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 F8W8V4 182 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 APOC4-APOC2K7ER74 178 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 AGPSO00116 658 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 LIN7AO14910 233 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 AP2A2O94973 939 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 APOC2P02655 101 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 CBSLP0DN79 551 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 MYBL2P10244 700 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 UGT2B7P16662 529 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ITGA3P26006 1051 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PTX3P26022 381 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ACRV1P26436 265 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PSMB4P28070 264 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 RBL1P28749 1068 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PDHA2P29803 388 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ADRA1AP35348 466 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 CBSP35520 551 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ZNF140P52738 457 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 SOX8P57073 446 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PLOD1Q02809 727 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 AIMP2Q13155 320 aaKnown RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ESPL1Q14674 2120 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 DEFB110Q30KQ9 67 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 NKAIN1Q4KMZ8 207 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ANKRD20A2Q5SQ80 823 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ANKRD20A1Q5TYW2 823 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 AGAP7PQ5VUJ5 663 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ANKRD20A3Q5VUR7 823 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 Q6ZS92 163 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 BBS12Q6ZW61 710 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 TAS2R42Q7RTR8 314 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 SERPINA9Q86WD7 417 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 TICAM1Q8IUC6 712 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 TMTC1Q8IUR5 882 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ZZZ3Q8IYH5 903 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 KATNAL2Q8IYT4 538 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 TBC1D21Q8IYX1 336 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 MYO1HQ8N1T3 1032 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ST6GALNAC3Q8NDV1 305 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 C1orf162Q8NEQ5 155 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PPP4R1Q8TF05 950 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 MOCOSQ96EN8 888 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 AGAP4Q96P64 663 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ALS2CR12Q96Q35 445 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 CHP1Q99653 195 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 WDR77Q9BQA1 342 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 HEMGNQ9BXL5 484 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 SPRTNQ9H040 489 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 FAM96AQ9H5X1 160 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 EPS8L2Q9H6S3 715 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 FAM60AQ9NP50 221 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 OR6C2Q9NZP2 312 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ASH2LQ9UBL3 628 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 1122.9 ms