RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SPATA7Q9P0W8 599 aa12.12□□□□□ -0.47
TMEM54-206ENST00000482771 TCAF1Q9Y4C2 921 aa12.12□□□□□ -0.47
TMEM54-206ENST00000482771 PCDHGB6Q9Y5F9 930 aa12.12□□□□□ -0.47
TMEM54-206ENST00000482771 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
TMEM54-206ENST00000482771 TXNDC9O14530 226 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PHF2O75151 1096 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MATN4O95460 622 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 STATHP02808 62 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 CD46P15529 392 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 ABOP16442 354 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 FMO4P31512 558 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 CYLC1P35663 651 aaPredicted RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 FDFT1P37268 417 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 AVPR1BP47901 424 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 EIF3BP55884 814 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 FAM53BQ14153 422 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 OR1C1Q15619 314 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 NDUFA9Q16795 377 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MEP1AQ16819 746 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MINDY4Q4G0A6 757 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 LRRC6Q86X45 466 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PLD3Q8IV08 490 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 SHISA5Q8N114 240 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 ARHGEF39Q8N4T4 335 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MDS2Q8NDY4 140 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PPHLN1Q8NEY8 458 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 AGAP11Q8TF27 550 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PEX13Q92968 403 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 FAM136AQ96C01 138 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 UTP6Q9NYH9 597 aaKnown RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 PCYOX1Q9UHG3 505 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
TMEM54-206ENST00000482771 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 NIPBLQ6KC79 2804 aaeCLIP12.11□□□□□ -0.47
TMEM54-206ENST00000482771 HEATR5BQ9P2D3 2071 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ASPDHA6ND91 283 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ARHGEF33A8MVX0 844 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 P2RX6O15547 441 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 MAN1A2O60476 641 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 IFNB1P01574 187 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ETS1P14921 441 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 RPS3P23396 243 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 HSF1Q00613 529 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 OC90Q02509 493 aaPredicted RBP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 RELAQ04206 551 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 PCID2Q5JVF3 399 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 CTSL3PQ5NE16 218 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ICE2Q659A1 982 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 GALNTL5Q7Z4T8 443 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 PRUNE1Q86TP1 453 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 CRLF3Q8IUI8 442 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 UBL4BQ8N7F7 174 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 OR51Q1Q8NH59 317 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 CA5BP1Q8WTZ4 195 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 SDCCAG3Q96C92 435 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 PKP4Q99569 1192 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 NPAS2Q99743 824 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 RAB6BQ9NRW1 208 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
TMEM54-206ENST00000482771 C19orf25Q9UFG5 118 aaPredicted RBP12.1□□□□□ -0.47
TMEM54-206ENST00000482771 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 E9PLN8 166 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 H7BY64 318 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ADAM10O14672 748 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SP1P08047 785 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ERGP11308 486 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 EZRP15311 586 aaKnown RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 CHRM3P20309 590 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PNLIPRP1P54315 467 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 CRADDP78560 199 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ARHGAP19Q14CB8 494 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SLC25A25Q6KCM7 469 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ADCK2Q7Z695 626 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ANKRD37Q7Z713 158 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SDCCAG8Q86SQ7 713 aaPredicted RBP12.09□□□□□ -0.47
TMEM54-206ENST00000482771 SIAH3Q8IW03 269 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 GHDCQ8N2G8 530 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 TMEM178AQ8NBL3 297 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 ACBD4Q8NC06 268 aa12.09□□□□□ -0.47
TMEM54-206ENST00000482771 PPFIBP2Q8ND30 876 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms