RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 LINC00303Q3SY05 128 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 CDKL4Q5MAI5 379 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 PRMT9Q6P2P2 845 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 PCSK4Q6UW60 755 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 TCAIMQ8N3R3 496 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 METTL27Q8N6F8 245 aaPredicted RBP17.54■□□□□ 0.4
SMIM4-204ENST00000482728 ABHD11Q8NFV4 315 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 SLC44A1Q8WWI5 657 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 SLC5A11Q8WWX8 675 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 THAP4Q8WY91 577 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 KIAA1191Q96A73 305 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 RHBDF1Q96CC6 855 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 OR4K3Q96R72 315 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
SMIM4-204ENST00000482728 RUVBL1Q9Y265 456 aaKnown RBP17.54■□□□□ 0.4
SMIM4-204ENST00000482728 MAN2B2Q9Y2E5 1009 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 PTRH2Q9Y3E5 179 aaKnown RBP17.54■□□□□ 0.4
SMIM4-204ENST00000482728 FER1L5A0AVI2 2057 aa17.54■□□□□ 0.4
SMIM4-204ENST00000482728 KRT38O76015 456 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 C2P06681 752 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 FURINP09958 794 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 FAM87AP0C7U9 286 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 SFTPCP11686 197 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 TFEBP19484 476 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 FOLR3P41439 243 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 OR1D4P47884 311 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 SERPINB8P50452 374 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 OR4D1Q15615 310 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 NDUFA9Q16795 377 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 FAM83EQ2M2I3 478 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 HKDC1Q2TB90 917 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 FAM69BQ5VUD6 431 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 GARNL3Q5VVW2 1013 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 SULT1C3Q6IMI6 304 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 OVCH1Q7RTY7 1134 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 CAMKVQ8NCB2 501 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 NEIL2Q969S2 332 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 PTERQ96BW5 349 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 TSNARE1Q96NA8 513 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 PAFAH2Q99487 392 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 ALG9Q9H6U8 611 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 ZNF304Q9HCX3 659 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 SNX15Q9NRS6 342 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 WWOXQ9NZC7 414 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 MAU2Q9Y6X3 613 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 CCDC88CQ9P219 2028 aa17.53■□□□□ 0.4
SMIM4-204ENST00000482728 A0A096LPK6 155 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 EXOC1LA0A1B0GW35 172 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 FEZF1A0PJY2 475 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 HMX2A2RU54 273 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 OR1F1O43749 312 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 ZNF500O60304 480 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-204ENST00000482728 H2AFYO75367 372 aaKnown RBP17.52■□□□□ 0.4
SMIM4-204ENST00000482728 KLF7O75840 302 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-204ENST00000482728 WDR47O94967 919 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 ONECUT2O95948 504 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 ALBP02768 609 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 FAM153BP0C7A2 387 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 GMPRP36959 345 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 POLE2P56282 527 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 IL10RAQ13651 578 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 FAM153CQ494X1 144 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 LGSNQ5TDP6 509 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 ISCA2Q86U28 154 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 RAB43Q86YS6 212 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 OR4K1Q8NGD4 311 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.52■□□□□ 0.4
SMIM4-204ENST00000482728 EXT2Q93063 718 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 FKBP10Q96AY3 582 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 NXNL1Q96CM4 212 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 SLC22A11Q9NSA0 550 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 IGSF5Q9NSI5 407 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 KCNMB2Q9Y691 235 aa17.52■□□□□ 0.4
SMIM4-204ENST00000482728 PRPF4O43172 522 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 LCMT2O60294 686 aaKnown RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 IPO13O94829 963 aaKnown RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 STATHP02808 62 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 ABHD2P08910 425 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 GNAZP19086 355 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 CNTFP26441 200 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 OTX2P32243 289 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 GDF5P43026 501 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 MEF2AQ02078 507 aaPredicted RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 OCA2Q04671 838 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 DLG1Q12959 904 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 ATMQ13315 3056 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 SSPNQ14714 243 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 C18orf21Q32NC0 220 aaPredicted RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 CATSPEREQ5SY80 951 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 MRPL14Q6P1L8 145 aaKnown RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 KLC3Q6P597 504 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 NXPE4Q6UWF7 544 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 ASPGQ86U10 573 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 EXD3Q8N9H8 876 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 EIF1ADQ8N9N8 165 aaKnown RBP17.51■□□□□ 0.39
SMIM4-204ENST00000482728 MFSD9Q8NBP5 474 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 OR2Y1Q8NGV0 311 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 KCTD4Q8WVF5 259 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 SLC13A3Q8WWT9 602 aa17.51■□□□□ 0.39
SMIM4-204ENST00000482728 MVB12AQ96EY5 273 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms