RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLIRPQ9GZT3 109 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 IL1RAPQ9NPH3 570 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 SIRT5Q9NXA8 310 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 DNAJC27Q9NZQ0 273 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PCDHGB6Q9Y5F9 930 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 C5orf58C9J3I9 102 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 WISP3O95389 354 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 C9P02748 559 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 SERPIND1P05546 499 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 EPORP19235 508 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TNNI3P19429 210 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TGM4P49221 684 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 IER5LQ5T953 404 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PRSS48Q7RTY5 328 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TSPYL5Q86VY4 417 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 MINDY2Q8NBR6 621 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PIH1D2Q8WWB5 315 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 ZNF300Q96RE9 604 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 CLMPQ9H6B4 373 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 RLIMQ9NVW2 624 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 KLHL3Q9UH77 587 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 WASH4PA8MWX3 477 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 FAM227AF5H4B4 570 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 NUAK1O60285 661 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 GUCY1B2O75343 617 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 NFATC2Q13469 925 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PCBP2Q15366 365 aaKnown RBP eCLIP12.31□□□□□ -0.442e-10■■■□□ 19
VPS52-218ENST00000482399 NRARPQ7Z6K4 114 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 GALNT12Q8IXK2 581 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 ENTHD1Q8IYW4 607 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 CPPED1Q9BRF8 314 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 DUSP26Q9BV47 211 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 ZDHHC6Q9H6R6 413 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 IL26Q9NPH9 171 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 DYRK4Q9NR20 520 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 IL17CQ9P0M4 197 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PRKAB1Q9Y478 270 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 FAM47E-STBD1D6RA91 191 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 J3KTA2 159 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 M0QZQ0 153 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 GFRA2O00451 464 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 SMAD6O43541 496 aaKnown RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 KCNK2O95069 426 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 EBLN1P0CF75 366 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 HOXD8P13378 290 aaPredicted RBP12.31□□□□□ -0.44
VPS52-218ENST00000482399 ETFAP13804 333 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 CA5AP35218 305 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 ATP6V1E1P36543 226 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 SOX3P41225 446 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 CSKP41240 450 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 ACVR1Q04771 509 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TBRG1Q3YBR2 411 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 FRG2Q64ET8 278 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 LRRC66Q68CR7 880 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 TMPRSS11AQ6ZMR5 421 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 GALNT7Q86SF2 657 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 DTX3Q8N9I9 347 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 FRG2BQ96QU4 278 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 PTPN18Q99952 460 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 SLC32A1Q9H598 525 aa12.31□□□□□ -0.44
VPS52-218ENST00000482399 MTMR11A4FU01 709 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 TRIM64A6NGJ6 449 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 FAM220BPB1ANY3 271 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 OR10H3O60404 316 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CPNE3O75131 537 aaKnown RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 TNFRSF21O75509 655 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 GSTM1P09488 218 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 HNF4AP41235 474 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CASP3P42574 277 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 ZNF157P51786 506 aaPredicted RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 CDC42P60953 191 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 SPDYE7PQ495Y7 208 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 SNAP47Q5SQN1 464 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CERS6Q6ZMG9 384 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 OR5M11Q96RB7 305 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 PCDHGB3Q9Y5G1 929 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 LAMA2P24043 3122 aaKnown RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 WWP2O00308 870 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 SLC16A6O15403 523 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 KDELR3O43731 214 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 CLDN8P56748 225 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 IL18R1Q13478 541 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 KCNA10Q16322 511 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
VPS52-218ENST00000482399 C10orf62Q5T681 223 aaPredicted RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 SYT6Q5T7P8 510 aaPredicted RBP12.3□□□□□ -0.44
VPS52-218ENST00000482399 NEK5Q6P3R8 708 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms