RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IGSF1Q8N6C5 1336 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 A0A087WW49 117 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 A0A0U1RQK1 487 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 FAM170AA1A519 330 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 ZNF320A2RRD8 509 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 CCER2I3L3R5 266 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 PSMA7O14818 248 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 EPHB6O15197 1021 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 EXTL3O43909 919 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 KRT33AO76009 404 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 SEC24AO95486 1093 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 C9P02748 559 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 HMBSP08397 361 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 CEBPBP17676 345 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 SP100P23497 879 aaPredicted RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 OR3A1P47881 315 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 LEPRP48357 1165 aaKnown RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 DNA2P51530 1060 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 CRIP2P52943 208 aaPredicted RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 CSNK2BP67870 215 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 ZNF74Q16587 644 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 TMEM30BQ3MIR4 351 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 OR4C11Q6IEV9 310 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 ZNF770Q6IQ21 691 aaPredicted RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 ARHGAP11AQ6P4F7 1023 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 LEKR1Q6ZMV7 388 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 LINC00696Q6ZRV3 163 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 PIGWQ7Z7B1 504 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 HOOK3Q86VS8 718 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 CCDC63Q8NA47 563 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 SLC37A3Q8NCC5 494 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 AZIN2Q96A70 460 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 VMP1Q96GC9 406 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 RBM41Q96IZ5 413 aaKnown RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 TUFT1Q9NNX1 390 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 EPHA6Q9UF33 1036 aa5□□□□□ -1.61
SF3B1-210ENST00000482158 HBS1LQ9Y450 684 aaKnown RBP5□□□□□ -1.61
SF3B1-210ENST00000482158 CNTNAP2Q9UHC6 1331 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 TMEM150CB9EJG8 249 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 STX6O43752 255 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 DLATP10515 647 aaKnown RBP4.99□□□□□ -1.61
SF3B1-210ENST00000482158 MYL7Q01449 175 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 FOLH1Q04609 750 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 IL10RBQ08334 325 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 SLMAPQ14BN4 828 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 CCDC6Q16204 474 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 FAM46CQ5VWP2 391 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 TTC27Q6P3X3 843 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 PODNL1Q6PEZ8 512 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 BHLHB9Q6PI77 547 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 Q6ZTC4 211 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 GPR141Q7Z602 305 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 CCDC60Q8IWA6 550 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-210ENST00000482158 SAP25Q8TEE9 199 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 AK8Q96MA6 479 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 LPAR4Q99677 370 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 EGLN3Q9H6Z9 239 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 TMEM206Q9H813 350 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 PPANQ9NQ55 473 aaKnown RBP4.99□□□□□ -1.61
SF3B1-210ENST00000482158 C19orf25Q9UFG5 118 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-210ENST00000482158 LIPT1Q9Y234 373 aa4.99□□□□□ -1.61
SF3B1-210ENST00000482158 MYH15Q9Y2K3 1946 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 A0A087WUV0 522 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 H3BMM5 538 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 TEX28O15482 410 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 MOCS2O96007 188 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SLC2A2P11168 524 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 EEF2P13639 858 aaKnown RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 ZNF26P17031 533 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 ATP5DP30049 168 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SSTR1P30872 391 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SFTPDP35247 375 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SOAT1P35610 550 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 LBX1P52954 281 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 OR1D5P58170 312 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 TRIM29Q14134 588 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 Q6ZSR9 355 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 C5orf24Q7Z6I8 188 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 PTAR1Q7Z6K3 402 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 MEX3DQ86XN8 651 aaKnown RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 C4orf19Q8IY42 314 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 FAM9BQ8IZU0 186 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 DDHD1Q8NEL9 900 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 OR7G3Q8NG95 312 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 OR10G8Q8NGN5 311 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 GATAD1Q8WUU5 269 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 METTL21AQ8WXB1 218 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 GMPPAQ96IJ6 420 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 NECTIN4Q96NY8 510 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 DUX3Q96PT4 197 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 FUCA2Q9BTY2 467 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 PITPNM3Q9BZ71 974 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 LSG1Q9H089 658 aaKnown RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SCRT2Q9NQ03 307 aa4.98□□□□□ -1.61
SF3B1-210ENST00000482158 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 INTS10Q9NVR2 710 aaKnown RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 ARGLU1Q9NWB6 273 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-210ENST00000482158 SLCO1C1Q9NYB5 712 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms