RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 AGTRAPQ6RW13 159 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 KIRREL2Q6UWL6 708 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 ISLR2Q6UXK2 745 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 CYHR1Q6ZMK1 362 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 Q6ZS92 163 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 STRA8Q7Z7C7 330 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 CREG2Q8IUH2 290 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 OR4N4Q8N0Y3 316 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 EEF1AKMT1Q8WVE0 214 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 SEC16BQ96JE7 1060 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 TRIM56Q9BRZ2 755 aaKnown RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 SARGQ9BW04 601 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 YIPF2Q9BWQ6 316 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 CLK4Q9HAZ1 481 aaKnown RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 ANKHQ9HCJ1 492 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 MAP10Q9P2G4 905 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 GALPQ9UBC7 116 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 VWA7Q9Y334 891 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 TEX264Q9Y6I9 313 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 MAU2Q9Y6X3 613 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 EFCAB8A8MWE9 144 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 H7BY64 318 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 HAT1O14929 419 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 AGFG2O95081 481 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 AHSGP02765 367 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 SERPINA7P05543 415 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CTSBP07858 339 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 C8orf89P0DMQ9 161 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 JAK1P23458 1154 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ELK3P41970 407 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 TSFMP43897 325 aaKnown RBP10.88□□□□□ -0.67
CCM2-213ENST00000480658 SLC12A2P55011 1212 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CDKL1Q00532 357 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CAV1Q03135 178 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 RGS1Q08116 209 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 MGAT5Q09328 741 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 MFAP5Q13361 173 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PWP1Q13610 501 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ZNF169Q14929 603 aaPredicted RBP10.88□□□□□ -0.67
CCM2-213ENST00000480658 TEDDM1Q5T9Z0 273 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 HECTD2Q5U5R9 776 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 FAM69BQ5VUD6 431 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ATG9BQ674R7 924 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PAQR3Q6TCH7 311 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 FRA10AC1Q70Z53 315 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ABHD13Q7L211 337 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ADAMTSL2Q86TH1 951 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 KLHL7Q8IXQ5 586 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 TCAIMQ8N3R3 496 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PPFIBP2Q8ND30 876 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 TSPAN17Q96FV3 270 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CFAP36Q96G28 342 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PRAP1Q96NZ9 151 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 NDNQ99608 321 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 TUBB6Q9BUF5 446 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 SGPP1Q9BX95 441 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 CAPS2Q9BXY5 557 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PITHD1Q9GZP4 211 aaPredicted RBP10.88□□□□□ -0.67
CCM2-213ENST00000480658 RNF32Q9H0A6 362 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 KCNF1Q9H3M0 494 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 ABI3Q9P2A4 366 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 PDE10AQ9Y233 779 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 MRPS2Q9Y399 296 aaKnown RBP10.88□□□□□ -0.67
CCM2-213ENST00000480658 SLC22A7Q9Y694 548 aa10.88□□□□□ -0.67
CCM2-213ENST00000480658 LOC102723996A0A087X1L8 192 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 E7ESA3 106 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 BMP10O95393 424 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 GSTA2P09210 222 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 GP1BBP13224 206 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 IVDP26440 423 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 AHRP35869 848 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 ITGA8P53708 1063 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 MEF2AQ02078 507 aaPredicted RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 RAPSNQ13702 412 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 HKDC1Q2TB90 917 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 RPUSD3Q6P087 351 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 ASPGQ86U10 573 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.67
CCM2-213ENST00000480658 METTL27Q8N6F8 245 aaPredicted RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 Q8NA96 180 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 C7orf57Q8NEG2 295 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 ABHD11Q8NFV4 315 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 TTLQ8NG68 377 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 OR56A3Q8NH54 315 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 SUN3Q8TAQ9 357 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 DNAJB14Q8TBM8 379 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 FBXL8Q96CD0 374 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 THOC3Q96J01 351 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
CCM2-213ENST00000480658 CNOT10Q9H9A5 744 aaKnown RBP10.87□□□□□ -0.67
CCM2-213ENST00000480658 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms